RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 P2RY13Q9BPV8 354 aa17.11■□□□□ 0.33
COL1A1-202ENST00000463440 SEMA4AQ9H3S1 761 aa17.11■□□□□ 0.33
COL1A1-202ENST00000463440 SH3BP1Q9Y3L3 701 aa17.11■□□□□ 0.33
COL1A1-202ENST00000463440 MYO16Q9Y6X6 1858 aa17.11■□□□□ 0.33
COL1A1-202ENST00000463440 A0A1W2PQH9 124 aa17.1■□□□□ 0.33
COL1A1-202ENST00000463440 GFRA3O60609 400 aa17.1■□□□□ 0.33
COL1A1-202ENST00000463440 DRD1P21728 446 aa17.1■□□□□ 0.33
COL1A1-202ENST00000463440 CXCL12P48061 93 aa17.1■□□□□ 0.33
COL1A1-202ENST00000463440 PGFP49763 221 aa17.1■□□□□ 0.33
COL1A1-202ENST00000463440 GOLGA8FQ08AF8 430 aa17.1■□□□□ 0.33
COL1A1-202ENST00000463440 GOLGA8DPQ0D2H9 430 aa17.1■□□□□ 0.33
COL1A1-202ENST00000463440 RRAGAQ7L523 313 aa17.1■□□□□ 0.33
COL1A1-202ENST00000463440 TADA2BQ86TJ2 420 aa17.1■□□□□ 0.33
COL1A1-202ENST00000463440 PIGZQ86VD9 579 aa17.1■□□□□ 0.33
COL1A1-202ENST00000463440 CHFRQ96EP1 664 aa17.1■□□□□ 0.33
COL1A1-202ENST00000463440 ZFRQ96KR1 1074 aaKnown RBP17.1■□□□□ 0.33
COL1A1-202ENST00000463440 MED15Q96RN5 788 aa17.1■□□□□ 0.33
COL1A1-202ENST00000463440 FAM126AQ9BYI3 521 aaPredicted RBP17.1■□□□□ 0.33
COL1A1-202ENST00000463440 INTS2Q9H0H0 1204 aaKnown RBP17.1■□□□□ 0.33
COL1A1-202ENST00000463440 CYLDQ9NQC7 956 aa17.1■□□□□ 0.33
COL1A1-202ENST00000463440 NAGPAQ9UK23 515 aa17.1■□□□□ 0.33
COL1A1-202ENST00000463440 TSPAN16Q9UKR8 245 aa17.1■□□□□ 0.33
COL1A1-202ENST00000463440 USP3Q9Y6I4 520 aa17.1■□□□□ 0.33
COL1A1-202ENST00000463440 R4GN57 208 aa17.1■□□□□ 0.33
COL1A1-202ENST00000463440 XPO1O14980 1071 aaKnown RBP17.09■□□□□ 0.33
COL1A1-202ENST00000463440 RALAP11233 206 aa17.09■□□□□ 0.33
COL1A1-202ENST00000463440 RARGP13631 454 aa17.09■□□□□ 0.33
COL1A1-202ENST00000463440 ERCC5P28715 1186 aaPredicted RBP17.09■□□□□ 0.33
COL1A1-202ENST00000463440 MTIF2P46199 727 aaKnown RBP17.09■□□□□ 0.33
COL1A1-202ENST00000463440 GALK1P51570 392 aa17.09■□□□□ 0.33
COL1A1-202ENST00000463440 BST2Q10589 180 aaKnown RBP17.09■□□□□ 0.33
COL1A1-202ENST00000463440 DPCR1Q3MIW9 517 aa17.09■□□□□ 0.33
COL1A1-202ENST00000463440 FSTL4Q6MZW2 842 aa17.09■□□□□ 0.33
COL1A1-202ENST00000463440 KLHDC10Q6PID8 442 aa17.09■□□□□ 0.33
COL1A1-202ENST00000463440 Q6ZS52 159 aa17.09■□□□□ 0.33
COL1A1-202ENST00000463440 TTC30AQ86WT1 665 aa17.09■□□□□ 0.33
COL1A1-202ENST00000463440 ARHGEF19Q8IW93 802 aa17.09■□□□□ 0.33
COL1A1-202ENST00000463440 FAM114A1Q8IWE2 563 aa17.09■□□□□ 0.33
COL1A1-202ENST00000463440 ADGRG2Q8IZP9 1017 aa17.09■□□□□ 0.33
COL1A1-202ENST00000463440 ARHGAP18Q8N392 663 aa17.09■□□□□ 0.33
COL1A1-202ENST00000463440 KAT5Q92993 513 aa17.09■□□□□ 0.33
COL1A1-202ENST00000463440 CD101Q93033 1021 aa17.09■□□□□ 0.33
COL1A1-202ENST00000463440 OTUB2Q96DC9 234 aa17.09■□□□□ 0.33
COL1A1-202ENST00000463440 CDK5RAP1Q96SZ6 601 aaKnown RBP17.09■□□□□ 0.33
COL1A1-202ENST00000463440 THAP9Q9H5L6 903 aa17.09■□□□□ 0.33
COL1A1-202ENST00000463440 NMUR1Q9HB89 426 aa17.09■□□□□ 0.33
COL1A1-202ENST00000463440 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.09■□□□□ 0.33
COL1A1-202ENST00000463440 PRR23AA6NEV1 266 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 O00370 1275 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 SCAMP3O14828 347 aaKnown RBP17.08■□□□□ 0.32
COL1A1-202ENST00000463440 TBX18O95935 607 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 ADH1CP00326 375 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 CYP17A1P05093 508 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 SETSIPP0DME0 302 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 NRLP54845 237 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 PDE4CQ08493 712 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 GAS6Q14393 721 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 DHCR24Q15392 516 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 STILQ15468 1287 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 FBXO43Q4G163 708 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 RAB41Q5JT25 222 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 C10orf120Q5SQS8 335 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 TSSK4Q6SA08 328 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 LCLAT1Q6UWP7 414 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 IRF2BP1Q8IU81 584 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 ZNF276Q8N554 614 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 RBBP8NLQ8NC74 664 aaPredicted RBP17.08■□□□□ 0.32
COL1A1-202ENST00000463440 ATRIPQ8WXE1 791 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 FAM81BQ96LP2 452 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 KLF16Q9BXK1 252 aaPredicted RBP17.08■□□□□ 0.32
COL1A1-202ENST00000463440 LRRC4Q9HBW1 653 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 OSER1Q9NX31 292 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 ZSCAN32Q9NX65 697 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 CLIC5Q9NZA1 410 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 DNMT3LQ9UJW3 386 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 PCDHGA2Q9Y5H1 932 aa17.08■□□□□ 0.32
COL1A1-202ENST00000463440 ATG13O75143 517 aa17.07■□□□□ 0.32
COL1A1-202ENST00000463440 EGFP01133 1207 aa17.07■□□□□ 0.32
COL1A1-202ENST00000463440 IRF1P10914 325 aa17.07■□□□□ 0.32
COL1A1-202ENST00000463440 TKTL1P51854 596 aa17.07■□□□□ 0.32
COL1A1-202ENST00000463440 SATB1Q01826 763 aa17.07■□□□□ 0.32
COL1A1-202ENST00000463440 CNGA2Q16280 664 aa17.07■□□□□ 0.32
COL1A1-202ENST00000463440 CT47A1Q5JQC4 288 aaPredicted RBP17.07■□□□□ 0.32
COL1A1-202ENST00000463440 GBP6Q6ZN66 633 aa17.07■□□□□ 0.32
COL1A1-202ENST00000463440 ENOSF1Q7L5Y1 443 aa17.07■□□□□ 0.32
COL1A1-202ENST00000463440 ASCL5Q7RTU5 278 aa17.07■□□□□ 0.32
COL1A1-202ENST00000463440 SCD5Q86SK9 330 aa17.07■□□□□ 0.32
COL1A1-202ENST00000463440 CCDC26Q8TAB7 109 aa17.07■□□□□ 0.32
COL1A1-202ENST00000463440 UBA3Q8TBC4 463 aa17.07■□□□□ 0.32
COL1A1-202ENST00000463440 TFAP2BQ92481 460 aa17.07■□□□□ 0.32
COL1A1-202ENST00000463440 CRACR2AQ9BSW2 395 aa17.07■□□□□ 0.32
COL1A1-202ENST00000463440 FBRSL1Q9HCM7 1045 aaKnown RBP17.07■□□□□ 0.32
COL1A1-202ENST00000463440 UBE2TQ9NPD8 197 aaPredicted RBP17.07■□□□□ 0.32
COL1A1-202ENST00000463440 LSM7Q9UK45 103 aaKnown RBP17.07■□□□□ 0.32
COL1A1-202ENST00000463440 GTPBP10A4D1E9 387 aaKnown RBP17.06■□□□□ 0.32
COL1A1-202ENST00000463440 RNF225M0QZC1 329 aaPredicted RBP17.06■□□□□ 0.32
COL1A1-202ENST00000463440 TULP2O00295 520 aa17.06■□□□□ 0.32
COL1A1-202ENST00000463440 PAPSS2O95340 614 aaPredicted RBP17.06■□□□□ 0.32
COL1A1-202ENST00000463440 ZBED1O96006 694 aa17.06■□□□□ 0.32
COL1A1-202ENST00000463440 LMNAP02545 664 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms