RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 CCER2I3L3R5 266 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 GFRA2O00451 464 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 YKT6O15498 198 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 XPOTO43592 962 aaKnown RBP14.34□□□□□ -0.11
C9orf3-211ENST00000463372 BAG4O95429 457 aaKnown RBP14.34□□□□□ -0.11
C9orf3-211ENST00000463372 GJB6O95452 261 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 CYP11A1P05108 521 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 CYP3A5P20815 502 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 GRIK1P39086 918 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 LILRA4P59901 499 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 GRIN1Q05586 938 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 SPAG1Q07617 926 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 ANO4Q32M45 955 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 FUT11Q495W5 492 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 GRAMD4Q6IC98 578 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 FAM124AQ86V42 546 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 PTRH1Q86Y79 214 aaKnown RBP14.34□□□□□ -0.11
C9orf3-211ENST00000463372 TICAM1Q8IUC6 712 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 SLFN12Q8IYM2 578 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 PRCCQ92733 491 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-211ENST00000463372 SGF29Q96ES7 293 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 SIPA1Q96FS4 1042 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 MRPL4Q9BYD3 311 aaKnown RBP14.34□□□□□ -0.11
C9orf3-211ENST00000463372 MKRN2Q9H000 416 aaKnown RBP14.34□□□□□ -0.11
C9orf3-211ENST00000463372 SH3GLB2Q9NR46 395 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 SMPD4Q9NXE4 827 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 CFAP97Q9P2B7 532 aa14.34□□□□□ -0.11
C9orf3-211ENST00000463372 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-211ENST00000463372 ZFC3H1O60293 1989 aaKnown RBP14.33□□□□□ -0.12
C9orf3-211ENST00000463372 GCFC2P16383 781 aaKnown RBP14.33□□□□□ -0.12
C9orf3-211ENST00000463372 PAX3P23760 479 aa14.33□□□□□ -0.12
C9orf3-211ENST00000463372 ACP1P24666 158 aa14.33□□□□□ -0.12
C9orf3-211ENST00000463372 RCAN1P53805 252 aa14.33□□□□□ -0.12
C9orf3-211ENST00000463372 SAFBQ15424 915 aaKnown RBP eCLIP14.33□□□□□ -0.12
C9orf3-211ENST00000463372 SKA1Q96BD8 255 aa14.33□□□□□ -0.12
C9orf3-211ENST00000463372 C6orf106Q9H6K1 298 aaPredicted RBP14.33□□□□□ -0.12
C9orf3-211ENST00000463372 CPQQ9Y646 472 aa14.33□□□□□ -0.12
C9orf3-211ENST00000463372 KIF26BQ2KJY2 2108 aa14.33□□□□□ -0.12
C9orf3-211ENST00000463372 CELSR1Q9NYQ6 3014 aa14.33□□□□□ -0.12
C9orf3-211ENST00000463372 WASH3PC4AMC7 463 aa14.32□□□□□ -0.12
C9orf3-211ENST00000463372 TRIM24O15164 1050 aa14.32□□□□□ -0.12
C9orf3-211ENST00000463372 HOXC11O43248 304 aaPredicted RBP14.32□□□□□ -0.12
C9orf3-211ENST00000463372 CCNT1O60563 726 aaKnown RBP14.32□□□□□ -0.12
C9orf3-211ENST00000463372 IGLV3-19P01714 112 aa14.32□□□□□ -0.12
C9orf3-211ENST00000463372 CD27P26842 260 aa14.32□□□□□ -0.12
C9orf3-211ENST00000463372 SLC7A9P82251 487 aa14.32□□□□□ -0.12
C9orf3-211ENST00000463372 SKOR1P84550 965 aa14.32□□□□□ -0.12
C9orf3-211ENST00000463372 CLN3Q13286 438 aa14.32□□□□□ -0.12
C9orf3-211ENST00000463372 NFE2Q16621 373 aaPredicted RBP14.32□□□□□ -0.12
C9orf3-211ENST00000463372 B4GALNT3Q6L9W6 998 aa14.32□□□□□ -0.12
C9orf3-211ENST00000463372 IGF2-ASQ6U949 168 aa14.32□□□□□ -0.12
C9orf3-211ENST00000463372 MPZL3Q6UWV2 235 aa14.32□□□□□ -0.12
C9orf3-211ENST00000463372 DDX42Q86XP3 938 aaKnown RBP eCLIP14.32□□□□□ -0.12
C9orf3-211ENST00000463372 TMPRSS6Q8IU80 811 aa14.32□□□□□ -0.12
C9orf3-211ENST00000463372 SRRM1Q8IYB3 904 aaKnown RBP14.32□□□□□ -0.12
C9orf3-211ENST00000463372 BLIDQ8IZY5 108 aa14.32□□□□□ -0.12
C9orf3-211ENST00000463372 ZNF564Q8TBZ8 553 aaPredicted RBP14.32□□□□□ -0.12
C9orf3-211ENST00000463372 OTUB2Q96DC9 234 aa14.32□□□□□ -0.12
C9orf3-211ENST00000463372 SLC4A5Q9BY07 1137 aa14.32□□□□□ -0.12
C9orf3-211ENST00000463372 CSMD1Q96PZ7 3565 aa14.32□□□□□ -0.12
C9orf3-211ENST00000463372 ADGRG4Q8IZF6 3080 aa14.32□□□□□ -0.12
C9orf3-211ENST00000463372 CKAP5Q14008 2032 aa14.31□□□□□ -0.12
C9orf3-211ENST00000463372 VILLO15195 856 aa14.31□□□□□ -0.12
C9orf3-211ENST00000463372 TRAK2O60296 914 aa14.31□□□□□ -0.12
C9orf3-211ENST00000463372 CSO75390 466 aaKnown RBP14.31□□□□□ -0.12
C9orf3-211ENST00000463372 AGFG2O95081 481 aa14.31□□□□□ -0.12
C9orf3-211ENST00000463372 CASRP41180 1078 aa14.31□□□□□ -0.12
C9orf3-211ENST00000463372 ARRB1P49407 418 aaPredicted RBP14.31□□□□□ -0.12
C9orf3-211ENST00000463372 TSPY1Q01534 308 aa14.31□□□□□ -0.12
C9orf3-211ENST00000463372 SEZ6Q53EL9 994 aa14.31□□□□□ -0.12
C9orf3-211ENST00000463372 C3orf38Q5JPI3 329 aa14.31□□□□□ -0.12
C9orf3-211ENST00000463372 ZNF787Q6DD87 383 aa14.31□□□□□ -0.12
C9orf3-211ENST00000463372 TARS2Q9BW92 718 aaKnown RBP14.31□□□□□ -0.12
C9orf3-211ENST00000463372 PLEKHA5Q9HAU0 1116 aa14.31□□□□□ -0.12
C9orf3-211ENST00000463372 DNAJC17Q9NVM6 304 aaKnown RBP14.31□□□□□ -0.12
C9orf3-211ENST00000463372 GEMIN8Q9NWZ8 242 aaKnown RBP14.31□□□□□ -0.12
C9orf3-211ENST00000463372 TRPM5Q9NZQ8 1165 aa14.31□□□□□ -0.12
C9orf3-211ENST00000463372 ATXN7L1Q9ULK2 861 aaPredicted RBP14.31□□□□□ -0.12
C9orf3-211ENST00000463372 PPEF2O14830 753 aa14.3□□□□□ -0.12
C9orf3-211ENST00000463372 SLC27A2O14975 620 aa14.3□□□□□ -0.12
C9orf3-211ENST00000463372 SYNCRIPO60506 623 aaKnown RBP14.3□□□□□ -0.12
C9orf3-211ENST00000463372 FSBPO95073 299 aa14.3□□□□□ -0.12
C9orf3-211ENST00000463372 CXCL8P10145 99 aa14.3□□□□□ -0.12
C9orf3-211ENST00000463372 CYP2F1P24903 491 aa14.3□□□□□ -0.12
C9orf3-211ENST00000463372 GUCY2FP51841 1108 aa14.3□□□□□ -0.12
C9orf3-211ENST00000463372 ZNF132P52740 706 aa14.3□□□□□ -0.12
C9orf3-211ENST00000463372 NOLC1Q14978 699 aaKnown RBP eCLIP14.3□□□□□ -0.12
C9orf3-211ENST00000463372 ZBTB6Q15916 424 aa14.3□□□□□ -0.12
C9orf3-211ENST00000463372 NEK8Q86SG6 692 aa14.3□□□□□ -0.12
C9orf3-211ENST00000463372 CACUL1Q86Y37 369 aa14.3□□□□□ -0.12
C9orf3-211ENST00000463372 BIRC7Q96CA5 298 aa14.3□□□□□ -0.12
C9orf3-211ENST00000463372 TCEANC2Q96MN5 208 aa14.3□□□□□ -0.12
C9orf3-211ENST00000463372 SLC46A1Q96NT5 459 aa14.3□□□□□ -0.12
C9orf3-211ENST00000463372 SLC26A6Q9BXS9 759 aa14.3□□□□□ -0.12
C9orf3-211ENST00000463372 RNF26Q9BY78 433 aaPredicted RBP14.3□□□□□ -0.12
C9orf3-211ENST00000463372 TMLHEQ9NVH6 421 aa14.3□□□□□ -0.12
C9orf3-211ENST00000463372 SATB2Q9UPW6 733 aa14.3□□□□□ -0.12
C9orf3-211ENST00000463372 STON1Q9Y6Q2 735 aa14.3□□□□□ -0.12
C9orf3-211ENST00000463372 SVILO95425 2214 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 MED13LQ71F56 2210 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms