RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ITGB1P05556 798 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 PTPN9P43378 593 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 BRCC3P46736 316 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 EIF3EP60228 445 aaKnown RBP13.38□□□□□ -0.27
VAPB-203ENST00000463370 IFI35P80217 286 aaPredicted RBP13.38□□□□□ -0.27
VAPB-203ENST00000463370 CAV1Q03135 178 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 KRT81Q14533 505 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 FASTKD3Q14CZ7 662 aaKnown RBP13.38□□□□□ -0.27
VAPB-203ENST00000463370 HP1BP3Q5SSJ5 553 aaPredicted RBP13.38□□□□□ -0.27
VAPB-203ENST00000463370 AGBL2Q5U5Z8 902 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 EMC10Q5UCC4 262 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 TRAF7Q6Q0C0 670 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 DSTYKQ6XUX3 929 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 HFE2Q6ZVN8 426 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 TRMT10CQ7L0Y3 403 aaKnown RBP13.38□□□□□ -0.27
VAPB-203ENST00000463370 GPRIN1Q7Z2K8 1008 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 RNF180Q86T96 592 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 ZC3H18Q86VM9 953 aaKnown RBP13.38□□□□□ -0.27
VAPB-203ENST00000463370 CCDC185Q8N715 623 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 FAM71DQ8N9W8 422 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 PCDH19Q8TAB3 1148 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 RAET1EQ8TD07 263 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 CENPIQ92674 756 aaPredicted RBP13.38□□□□□ -0.27
VAPB-203ENST00000463370 PCED1BQ96HM7 432 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 C9orf72Q96LT7 481 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 RNF157Q96PX1 679 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 RTP3Q9BQQ7 232 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 SYT15Q9BQS2 421 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 MED10Q9BTT4 135 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 PCDH9Q9HC56 1237 aa13.38□□□□□ -0.27
VAPB-203ENST00000463370 GOLGA8MH3BSY2 632 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 B4GALT3O60512 393 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 TOMM70O94826 608 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 LONRF1Q17RB8 773 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 BOLA3Q53S33 107 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 PPP6R3Q5H9R7 873 aaPredicted RBP13.37□□□□□ -0.27
VAPB-203ENST00000463370 RNASEH2BQ5TBB1 312 aaKnown RBP13.37□□□□□ -0.27
VAPB-203ENST00000463370 OTUD1Q5VV17 481 aaPredicted RBP13.37□□□□□ -0.27
VAPB-203ENST00000463370 ANKRD22Q5VYY1 191 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 LHX8Q68G74 356 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 RTN4RL1Q86UN2 441 aaPredicted RBP13.37□□□□□ -0.27
VAPB-203ENST00000463370 ZCCHC9Q8N567 271 aaKnown RBP13.37□□□□□ -0.27
VAPB-203ENST00000463370 PLD5Q8N7P1 536 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 TLCD1Q96CP7 247 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 SMOQ99835 787 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 TMPRSS4Q9NRS4 437 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 BANF1O75531 89 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 B3GAT3O94766 335 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 TTC4O95801 387 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 RBP3P10745 1247 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 CKBP12277 381 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 RPL22P35268 128 aaKnown RBP13.37□□□□□ -0.27
VAPB-203ENST00000463370 MTM1Q13496 603 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 ANKRD20A8PQ5CZ79 823 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 DEFB106AQ8N104 65 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 PYROXD2Q8N2H3 581 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 TTC13Q8NBP0 860 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 ZMIZ2Q8NF64 920 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 FAM149B1Q96BN6 582 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 RBM15Q96T37 977 aaKnown RBP eCLIP13.37□□□□□ -0.27
VAPB-203ENST00000463370 MAK16Q9BXY0 300 aaKnown RBP13.37□□□□□ -0.27
VAPB-203ENST00000463370 MTMR10Q9NXD2 777 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 SLC12A6Q9UHW9 1150 aa13.37□□□□□ -0.27
VAPB-203ENST00000463370 TPX2Q9ULW0 747 aaKnown RBP13.37□□□□□ -0.27
VAPB-203ENST00000463370 TCRBV7S3A2A0A539 114 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 FOXO6A8MYZ6 492 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 NRP1O14786 923 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 INHAP05111 366 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 ACADSBP45954 432 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 SNX16P57768 344 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 MRPS5P82675 430 aaKnown RBP13.36□□□□□ -0.27
VAPB-203ENST00000463370 NOMO1Q15155 1222 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 FAM26DQ5JW98 314 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 SYPL2Q5VXT5 272 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 HOOK3Q86VS8 718 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 FAM131BQ86XD5 332 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 CCDC33Q8N5R6 958 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 TEKT4Q8WW24 435 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 CYLDQ9NQC7 956 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.36□□□□□ -0.27
VAPB-203ENST00000463370 CTNNAL1Q9UBT7 734 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 FARP1Q9Y4F1 1045 aaPredicted RBP13.36□□□□□ -0.27
VAPB-203ENST00000463370 MCF2LO15068 1137 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 MDM4O15151 490 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 EIF3HO15372 352 aaKnown RBP eCLIP13.36□□□□□ -0.27
VAPB-203ENST00000463370 YY1P25490 414 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 L1CAMP32004 1257 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 CTCFP49711 727 aaPredicted RBP13.36□□□□□ -0.27
VAPB-203ENST00000463370 HTRA3P83110 453 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 AUHQ13825 339 aaKnown RBP13.36□□□□□ -0.27
VAPB-203ENST00000463370 ZSCAN26Q16670 478 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 DCAF6Q58WW2 860 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 ERMARDQ5T6L9 678 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 ZNF598Q86UK7 904 aaKnown RBP13.36□□□□□ -0.27
VAPB-203ENST00000463370 FAM35AQ86V20 835 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 BBOF1Q8ND07 529 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 CCHCR1Q8TD31 782 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 RSAD2Q8WXG1 361 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 LINC01599Q8WXQ3 324 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 CPT1BQ92523 772 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms