RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 LRRC39Q96DD0 335 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 STAMBPL1Q96FJ0 436 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 TSEN34Q9BSV6 310 aaKnown RBP12.21□□□□□ -0.45
RBM39-223ENST00000463004 SMYD3Q9H7B4 428 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 IPPQ9Y573 584 aa12.21□□□□□ -0.45
RBM39-223ENST00000463004 MTA2O94776 668 aa12.21□□□□□ -0.46
RBM39-223ENST00000463004 EOMESO95936 686 aa12.21□□□□□ -0.46
RBM39-223ENST00000463004 APOA4P06727 396 aa12.21□□□□□ -0.46
RBM39-223ENST00000463004 TMPRSS15P98073 1019 aa12.21□□□□□ -0.46
RBM39-223ENST00000463004 PTP4A2Q12974 167 aa12.21□□□□□ -0.46
RBM39-223ENST00000463004 BTG3Q14201 252 aaPredicted RBP12.21□□□□□ -0.46
RBM39-223ENST00000463004 BEND6Q5SZJ8 279 aaPredicted RBP12.21□□□□□ -0.46
RBM39-223ENST00000463004 CREG2Q8IUH2 290 aa12.21□□□□□ -0.46
RBM39-223ENST00000463004 ZNF558Q96NG5 402 aa12.21□□□□□ -0.46
RBM39-223ENST00000463004 TRABDQ9H4I3 376 aa12.21□□□□□ -0.46
RBM39-223ENST00000463004 L1RE1Q9UN81 338 aa12.21□□□□□ -0.46
RBM39-223ENST00000463004 HTR7P34969 479 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 TNFSF9P41273 254 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 CTCFP49711 727 aaPredicted RBP12.2□□□□□ -0.46
RBM39-223ENST00000463004 SCNN1GP51170 649 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 RENBPP51606 427 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 CDH8P55286 799 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 ADIGQ0VDE8 80 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 TERF2Q15554 542 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 TSNAXIP1Q2TAA8 658 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 FAM171A1Q5VUB5 890 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 NXNQ6DKJ4 435 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 RASAL3Q86YV0 1011 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 PSTKQ8IV42 348 aaKnown RBP12.2□□□□□ -0.46
RBM39-223ENST00000463004 GSPT2Q8IYD1 628 aaKnown RBP12.2□□□□□ -0.46
RBM39-223ENST00000463004 CASKIN2Q8WXE0 1202 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 ATP6V1E2Q96A05 226 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 TRIM54Q9BYV2 358 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 AKAP11Q9UKA4 1901 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 B4GALT5O43286 388 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 HNRNPCL1O60812 293 aaKnown RBP12.2□□□□□ -0.46
RBM39-223ENST00000463004 MAP2K2P36507 400 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 MLH1P40692 756 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 HADHAP40939 763 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 CCDC38Q502W7 563 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 IL31Q6EBC2 164 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 TBC1D1Q86TI0 1168 aaPredicted RBP12.2□□□□□ -0.46
RBM39-223ENST00000463004 TMEM139Q8IV31 216 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 FAM71DQ8N9W8 422 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 KAT5Q92993 513 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 CHMP6Q96FZ7 201 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 HES6Q96HZ4 224 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 TRPC7Q9HCX4 862 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 FAM8A1Q9UBU6 413 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 TFR2Q9UP52 801 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 STYXL1Q9Y6J8 313 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 HSPA4LO95757 839 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 KCNJ1P48048 391 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 GJC2Q5T442 439 aaPredicted RBP12.2□□□□□ -0.46
RBM39-223ENST00000463004 CCDC149Q6ZUS6 474 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 ACTL9Q8TC94 416 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 RMDN1Q96DB5 314 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 RPRD1AQ96P16 312 aaPredicted RBP12.2□□□□□ -0.46
RBM39-223ENST00000463004 FGFBP2Q9BYJ0 223 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 UBXN6Q9BZV1 441 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 DYRK4Q9NR20 520 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 RCOR3Q9P2K3 495 aaPredicted RBP12.2□□□□□ -0.46
RBM39-223ENST00000463004 TRIM33Q9UPN9 1127 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 SDR42E2A6NKP2 422 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 SH3BP5O60239 455 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 NOL4O94818 638 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 MMP8P22894 467 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 CYP2F1P24903 491 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 SFSWAPQ12872 951 aaKnown RBP12.2□□□□□ -0.46
RBM39-223ENST00000463004 HGSNATQ68CP4 663 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 NLRP9Q7RTR0 991 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 TEKT4Q8WW24 435 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 SHISA4Q96DD7 197 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 KREMEN1Q96MU8 473 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 PHACTR1Q9C0D0 580 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 SMYD2Q9NRG4 433 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 TBC1D13Q9NVG8 400 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 SRRDQ9UH36 339 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 PCYOX1Q9UHG3 505 aa12.2□□□□□ -0.46
RBM39-223ENST00000463004 CACNA1SQ13698 1873 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 SMIM28A0A1B0GU29 152 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 CILPO75339 1184 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 ZWINTO95229 277 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 NAB1Q13506 487 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 TTC39BQ5VTQ0 682 aaPredicted RBP12.19□□□□□ -0.46
RBM39-223ENST00000463004 DENND1BQ6P3S1 775 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 VSTM1Q6UX27 236 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 OR6P1Q8NGX9 317 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 BTBD6Q96KE9 485 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 LRRC40Q9H9A6 602 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 E5RJQ4 531 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 DAB1O75553 588 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 LUC7L3O95232 432 aaKnown RBP12.19□□□□□ -0.46
RBM39-223ENST00000463004 ASGR1P07306 291 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 TBX4P57082 545 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 SESN2P58004 480 aaPredicted RBP12.19□□□□□ -0.46
RBM39-223ENST00000463004 NAA30Q147X3 362 aaPredicted RBP12.19□□□□□ -0.46
RBM39-223ENST00000463004 PLEKHA7Q6IQ23 1121 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 LRRC43Q8N309 656 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 IRGQQ8WZA9 623 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms