RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 DPP3Q9NY33 737 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 BCCIPQ9P287 314 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMC3-202ENST00000462899 GTF3C4Q9UKN8 822 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 APOBEC2Q9Y235 224 aaKnown RBP8.26□□□□□ -1.09
SMC3-202ENST00000462899 STARD13Q9Y3M8 1113 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 NFE2L3Q9Y4A8 694 aa8.26□□□□□ -1.09
SMC3-202ENST00000462899 ARID1BQ8NFD5 2236 aaPredicted RBP8.25□□□□□ -1.09
SMC3-202ENST00000462899 NPHP3-ACAD11A0A0J9YXS1 232 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 ZNF840PA6NDX5 716 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 MYMKA6NI61 221 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 TISP43B9A030 160 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 ANKRD63C9JTQ0 380 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 CCNYL3P0C7X3 344 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 ADH5P11766 374 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 ACAT1P24752 427 aaKnown RBP8.25□□□□□ -1.09
SMC3-202ENST00000462899 ACOT2P49753 483 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 PDE6CP51160 858 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 GTF2BQ00403 316 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 KDSRQ06136 332 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 TRIM29Q14134 588 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 ANKRD1Q15327 319 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 SV2CQ496J9 727 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 TMEM119Q4V9L6 283 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 KRT79Q5XKE5 535 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 PCSK4Q6UW60 755 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 NT5DC4Q86YG4 428 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 MARCH9Q86YJ5 346 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 TMEM86AQ8N2M4 240 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 TRIML1Q8N9V2 468 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 FSIP1Q8NA03 581 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 TERB1Q8NA31 727 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 LSM14AQ8ND56 463 aaKnown RBP8.25□□□□□ -1.09
SMC3-202ENST00000462899 DNASE2BQ8WZ79 361 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 BICD1Q96G01 975 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 ZNF560Q96MR9 790 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 GABRG3Q99928 467 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 REEP2Q9BRK0 252 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 ZDHHC5Q9C0B5 715 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 PRORYQ9H606 182 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 ARHGEF4Q9NR80 690 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 GDAP2Q9NXN4 497 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 DDX43Q9NXZ2 648 aaKnown RBP8.25□□□□□ -1.09
SMC3-202ENST00000462899 LARSQ9P2J5 1176 aaKnown RBP8.25□□□□□ -1.09
SMC3-202ENST00000462899 ODF2LQ9ULJ1 636 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 PCDHB6Q9Y5E3 794 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 CPQQ9Y646 472 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 PLXNA2O75051 1894 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 PIEZO2Q9H5I5 2752 aa8.25□□□□□ -1.09
SMC3-202ENST00000462899 TRABD2BA6NFA1 517 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 EIF4E1BA6NMX2 242 aaKnown RBP8.24□□□□□ -1.09
SMC3-202ENST00000462899 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.24□□□□□ -1.09
SMC3-202ENST00000462899 K7ENM7 598 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 LAD1O00515 517 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 HOXC11O43248 304 aaPredicted RBP8.24□□□□□ -1.09
SMC3-202ENST00000462899 ZNF217O75362 1048 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 HOXB2P14652 356 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 ADSSP30520 456 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 PNPLA4P41247 253 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 ANAPC15P60006 121 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 NOP14P78316 857 aaKnown RBP8.24□□□□□ -1.09
SMC3-202ENST00000462899 CYP4F3Q08477 520 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 SMAD1Q15797 465 aaKnown RBP8.24□□□□□ -1.09
SMC3-202ENST00000462899 PTPRNQ16849 979 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 PLEKHG6Q3KR16 790 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 LY6G5CQ5SRR4 150 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 TRMT11Q7Z4G4 463 aaKnown RBP8.24□□□□□ -1.09
SMC3-202ENST00000462899 ZNF843Q8N446 348 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 ZNF513Q8N8E2 541 aaPredicted RBP8.24□□□□□ -1.09
SMC3-202ENST00000462899 C1orf127Q8N9H9 656 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 TTC16Q8NEE8 873 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 FBXO18Q8NFZ0 1043 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 C1orf216Q8TAB5 229 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 KBTBD7Q8WVZ9 684 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 RAB34Q9BZG1 259 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 ST6GALNAC4Q9H4F1 302 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 FAM124BQ9H5Z6 455 aaPredicted RBP8.24□□□□□ -1.09
SMC3-202ENST00000462899 IL21RQ9HBE5 538 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 CRTAC1Q9NQ79 661 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 TMEM30AQ9NV96 361 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 MAP10Q9P2G4 905 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 SUSD2Q9UGT4 822 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 CYP8B1Q9UNU6 501 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 FNDC3AQ9Y2H6 1198 aaKnown RBP8.24□□□□□ -1.09
SMC3-202ENST00000462899 PCDHB9Q9Y5E1 797 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 PCDHGB2Q9Y5G2 931 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 RAI2Q9Y5P3 530 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 FLNCQ14315 2725 aa8.24□□□□□ -1.09
SMC3-202ENST00000462899 E9PAM4 449 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 SLC9A3R1O14745 358 aaPredicted RBP8.23□□□□□ -1.09
SMC3-202ENST00000462899 SCAMP3O14828 347 aaKnown RBP8.23□□□□□ -1.09
SMC3-202ENST00000462899 TRIM24O15164 1050 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 TULP3O75386 442 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 AP1G2O75843 785 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 ADH1CP00326 375 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 ATXN1LP0C7T5 689 aaKnown RBP8.23□□□□□ -1.09
SMC3-202ENST00000462899 PLA2G4BP0C869 781 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 POLR2BP30876 1174 aaKnown RBP8.23□□□□□ -1.09
SMC3-202ENST00000462899 NTSR1P30989 418 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 MYL7Q01449 175 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 SOWAHAQ2M3V2 549 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms