RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 PTPRFP10586 1907 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 SLC26A4O43511 780 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 PSMD10O75832 226 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 SMC2O95347 1197 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 CELA3BP08861 270 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 CCND2P30279 289 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 CNR2P34972 360 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 MRPS9P82933 396 aaKnown RBP8.1□□□□□ -1.11
UBE4B-204ENST00000462658 ITKQ08881 620 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 TRIM25Q14258 630 aaKnown RBP8.1□□□□□ -1.11
UBE4B-204ENST00000462658 STX1AQ16623 288 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 TBR1Q16650 682 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 ANO6Q4KMQ2 910 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 LRCH2Q5VUJ6 765 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 NCAPH2Q6IBW4 605 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 BMP8AQ7Z5Y6 402 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 LYSMD2Q8IV50 215 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 FAM43AQ8N2R8 423 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 GPRC5AQ8NFJ5 357 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 SMARCE1Q969G3 411 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 CDK5RAP3Q96JB5 506 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 PTPN18Q99952 460 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 ZNF577Q9BSK1 485 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 WDR11Q9BZH6 1224 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 CUEDC2Q9H467 287 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 MROH8Q9H579 483 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 JADE2Q9NQC1 790 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 POLR3BQ9NW08 1133 aaPredicted RBP8.1□□□□□ -1.11
UBE4B-204ENST00000462658 ANO10Q9NW15 660 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 TUBE1Q9UJT0 475 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 A0A087WWV3 80 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 A0A0A6YYK5 440 aaPredicted RBP8.09□□□□□ -1.11
UBE4B-204ENST00000462658 MANSC4A6NHS7 340 aaPredicted RBP8.09□□□□□ -1.11
UBE4B-204ENST00000462658 IPO5O00410 1097 aaKnown RBP8.09□□□□□ -1.11
UBE4B-204ENST00000462658 CAVIN2O95810 425 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 XRCC6P12956 609 aaKnown RBP eCLIP8.09□□□□□ -1.11
UBE4B-204ENST00000462658 DEKP35659 375 aaKnown RBP8.09□□□□□ -1.11
UBE4B-204ENST00000462658 CCT6AP40227 531 aaKnown RBP8.09□□□□□ -1.11
UBE4B-204ENST00000462658 GCLCP48506 637 aaPredicted RBP8.09□□□□□ -1.11
UBE4B-204ENST00000462658 IGBP1P78318 339 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 CCNA1P78396 465 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 CNTN2Q02246 1040 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 FAPQ12884 760 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 GRM1Q13255 1194 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 ADAM15Q13444 863 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 TMEM119Q4V9L6 283 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 HYIQ5T013 277 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 ISM2Q6H9L7 571 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 BORAQ6PGQ7 559 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 SHCBP1Q8NEM2 672 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 DNERQ8NFT8 737 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 ERMNQ8TAM6 284 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 STAMQ92783 540 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 IWS1Q96ST2 819 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 PARK7Q99497 189 aaKnown RBP8.09□□□□□ -1.11
UBE4B-204ENST00000462658 RIT2Q99578 217 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 SOX7Q9BT81 388 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 TEKT3Q9BXF9 490 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 NT5C3AQ9H0P0 336 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 R3HDMLQ9H3Y0 253 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 MAGEF1Q9HAY2 307 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 AGO4Q9HCK5 861 aaKnown RBP8.09□□□□□ -1.11
UBE4B-204ENST00000462658 TRHDEQ9UKU6 1024 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 FAM184BQ9ULE4 1060 aa8.09□□□□□ -1.11
UBE4B-204ENST00000462658 ZSWIM8A7E2V4 1837 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 COL11A1P12107 1806 aaPredicted RBP8.08□□□□□ -1.12
UBE4B-204ENST00000462658 KDM3AQ9Y4C1 1321 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 ALG1L2C9J202 215 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 MAFGO15525 162 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 H2AFYO75367 372 aaKnown RBP8.08□□□□□ -1.12
UBE4B-204ENST00000462658 MED24O75448 989 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 STAM2O75886 525 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 FCER1AP12319 257 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 HNRNPLP14866 589 aaKnown RBP eCLIP8.08□□□□□ -1.12
UBE4B-204ENST00000462658 CASP1P29466 404 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 MEOX1P50221 254 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 ALDH5A1P51649 535 aaPredicted RBP8.08□□□□□ -1.12
UBE4B-204ENST00000462658 INHBEP58166 350 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 PPP2R5CQ13362 524 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 CUL4BQ13620 913 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 KCTD2Q14681 263 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 STXBP2Q15833 593 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 FSCN1Q16658 493 aaKnown RBP8.08□□□□□ -1.12
UBE4B-204ENST00000462658 UGT8Q16880 541 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 WDR78Q5VTH9 848 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 HAUS3Q68CZ6 603 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 C11orf57Q6ZUT1 292 aaPredicted RBP8.08□□□□□ -1.12
UBE4B-204ENST00000462658 CATSPER3Q86XQ3 398 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 LGI4Q8N135 537 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 ANKRD13CQ8N6S4 541 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 SPATA20Q8TB22 786 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 LRRC15Q8TF66 581 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 NKD2Q969F2 451 aaPredicted RBP8.08□□□□□ -1.12
UBE4B-204ENST00000462658 ACAP3Q96P50 834 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 INPP4AQ96PE3 977 aaPredicted RBP8.08□□□□□ -1.12
UBE4B-204ENST00000462658 GSDMAQ96QA5 445 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 EIF2AK1Q9BQI3 630 aaKnown RBP8.08□□□□□ -1.12
UBE4B-204ENST00000462658 HAPLN2Q9GZV7 340 aa8.08□□□□□ -1.12
UBE4B-204ENST00000462658 NAT10Q9H0A0 1025 aaKnown RBP8.08□□□□□ -1.12
UBE4B-204ENST00000462658 QRSL1Q9H0R6 528 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms