RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 CCDC85BQ15834 202 aaPredicted RBP6.19□□□□□ -1.42
VPS36-202ENST00000462289 MLANAQ16655 118 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 DUSP6Q16828 381 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 KLHL40Q2TBA0 621 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 ZACNQ401N2 412 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 TIGD5Q53EQ6 642 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 FBLN7Q53RD9 439 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 LCE4AQ5TA78 99 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 CDKAL1Q5VV42 579 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 C9orf57Q5W0N0 161 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 ANKRD40Q6AI12 368 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 SLC8B1Q6J4K2 584 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 ARMCX5Q6P1M9 558 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 FUT10Q6P4F1 479 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 LILRA6Q6PI73 481 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 IRF2BP1Q8IU81 584 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 WDR49Q8IV35 697 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 MRPL41Q8IXM3 137 aaKnown RBP6.19□□□□□ -1.42
VPS36-202ENST00000462289 LRRC52Q8N7C0 313 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 BEST2Q8NFU1 509 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 SLC22A17Q8WUG5 538 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 MYLIPQ8WY64 445 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 ARNTL2Q8WYA1 636 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 C18orf25Q96B23 403 aaPredicted RBP6.19□□□□□ -1.42
VPS36-202ENST00000462289 BICD1Q96G01 975 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 LIN37Q96GY3 246 aaPredicted RBP6.19□□□□□ -1.42
VPS36-202ENST00000462289 FAXDC2Q96IV6 333 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 KIRREL1Q96J84 757 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 CDCA3Q99618 268 aaPredicted RBP6.19□□□□□ -1.42
VPS36-202ENST00000462289 TCHPQ9BT92 498 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 XYLT2Q9H1B5 865 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 ALG13Q9NP73 1137 aaKnown RBP6.19□□□□□ -1.42
VPS36-202ENST00000462289 NGRNQ9NPE2 291 aaKnown RBP6.19□□□□□ -1.42
VPS36-202ENST00000462289 TLR9Q9NR96 1032 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 RBAKQ9NYW8 714 aaPredicted RBP6.19□□□□□ -1.42
VPS36-202ENST00000462289 FNIP2Q9P278 1114 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 TUBGCP4Q9UGJ1 667 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 PARP2Q9UGN5 583 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 INPP5FQ9Y2H2 1132 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 FAN1Q9Y2M0 1017 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 COQ4Q9Y3A0 265 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 PCDHB5Q9Y5E4 795 aa6.19□□□□□ -1.42
VPS36-202ENST00000462289 KIF26AQ9ULI4 1882 aaPredicted RBP6.19□□□□□ -1.42
VPS36-202ENST00000462289 HIDE1A8MVS5 230 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 PODXLO00592 558 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 GABRDO14764 452 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 PPEF2O14830 753 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 XPOTO43592 962 aaKnown RBP6.18□□□□□ -1.42
VPS36-202ENST00000462289 TSPAN15O95858 294 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 POU2F2P09086 479 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 TYMPP19971 482 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 NR2F2P24468 414 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 ERCC5P28715 1186 aaPredicted RBP6.18□□□□□ -1.42
VPS36-202ENST00000462289 GTF2H1P32780 548 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 AP3M2P53677 418 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 OSTNP61366 133 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 FKBP3Q00688 224 aaKnown RBP6.18□□□□□ -1.42
VPS36-202ENST00000462289 HYAL1Q12794 435 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 ELAVL2Q12926 359 aaKnown RBP6.18□□□□□ -1.42
VPS36-202ENST00000462289 ADAM15Q13444 863 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 TMEM132DQ14C87 1099 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 PTPROQ16827 1216 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 GLRA4Q5JXX5 417 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 RTP2Q5QGT7 225 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 RTL10Q7L3V2 364 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 TAS1R1Q7RTX1 841 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 NELFCDQ8IXH7 590 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 SYCP3Q8IZU3 236 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 EFHBQ8N7U6 833 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 MLKLQ8NB16 471 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 RNF169Q8NCN4 708 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 VN1R2Q8NFZ6 395 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 OR5B17Q8NGF7 314 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 LNX1Q8TBB1 728 aaPredicted RBP6.18□□□□□ -1.42
VPS36-202ENST00000462289 HDAC7Q8WUI4 952 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 SLC35C1Q96A29 364 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 CCDC47Q96A33 483 aaKnown RBP6.18□□□□□ -1.42
VPS36-202ENST00000462289 SAAL1Q96ER3 474 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 CCDC120Q96HB5 630 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 TMEM169Q96HH4 297 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 MSLNLQ96KJ4 702 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 RPS6KC1Q96S38 1066 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 PKMYT1Q99640 499 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 CGRRF1Q99675 332 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 FAM213AQ9BRX8 229 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 COLEC11Q9BWP8 271 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 APOL6Q9BWW8 343 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 KRTAP4-9Q9BYQ8 210 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 NUP62CLQ9H1M0 184 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 HSD3B7Q9H2F3 369 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 FAM124BQ9H5Z6 455 aaPredicted RBP6.18□□□□□ -1.42
VPS36-202ENST00000462289 NSUN3Q9H649 340 aaKnown RBP6.18□□□□□ -1.42
VPS36-202ENST00000462289 PDE11AQ9HCR9 933 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 MTRRQ9UBK8 725 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 CACNG4Q9UBN1 327 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 RWDD2AQ9UIY3 292 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 ITGA11Q9UKX5 1188 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 BACE2Q9Y5Z0 518 aa6.18□□□□□ -1.42
VPS36-202ENST00000462289 SF3B1O75533 1304 aaKnown RBP eCLIP6.18□□□□□ -1.42
VPS36-202ENST00000462289 MYO10Q9HD67 2058 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms