RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 GNL1P36915 607 aaPredicted RBP11.54□□□□□ -0.56
CBX3-205ENST00000462165 CACNA2D1P54289 1103 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 SLC14A1Q13336 389 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 DUOXA2Q1HG44 320 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 RRAGBQ5VZM2 374 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 BTBD8Q5XKL5 378 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 NUDT18Q6ZVK8 323 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 HS2ST1Q7LGA3 356 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 WDR49Q8IV35 697 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 SLC41A1Q8IVJ1 513 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 NUP93Q8N1F7 819 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 DEFB119Q8N690 84 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 NAT16Q8N8M0 369 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 TERB1Q8NA31 727 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 PDZD8Q8NEN9 1154 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 MRPL45Q9BRJ2 306 aaKnown RBP11.54□□□□□ -0.56
CBX3-205ENST00000462165 TMEM30AQ9NV96 361 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 PPP4R2Q9NY27 417 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 DEC1Q9P2X7 70 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 HCN2Q9UL51 889 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 GPSM3Q9Y4H4 160 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 MYH10P35580 1976 aa11.54□□□□□ -0.56
CBX3-205ENST00000462165 BPTFQ12830 3046 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 A0A1W2PQF6 199 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 COCHO43405 550 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 GJB3O75712 270 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 PRPF6O94906 941 aaKnown RBP11.53□□□□□ -0.56
CBX3-205ENST00000462165 RTN3O95197 1032 aaPredicted RBP11.53□□□□□ -0.56
CBX3-205ENST00000462165 IDEP14735 1019 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 PTPN1P18031 435 aaKnown RBP11.53□□□□□ -0.56
CBX3-205ENST00000462165 YWHAQP27348 245 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 SCAPQ12770 1279 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 IFRD2Q12894 506 aaPredicted RBP11.53□□□□□ -0.56
CBX3-205ENST00000462165 RABEP1Q15276 862 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 TRIP6Q15654 476 aaKnown RBP11.53□□□□□ -0.56
CBX3-205ENST00000462165 SNX30Q5VWJ9 437 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 LARP1BQ659C4 914 aaKnown RBP11.53□□□□□ -0.56
CBX3-205ENST00000462165 TRAPPC11Q7Z392 1133 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 CBWD2Q8IUF1 395 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 OR2I1PQ8NGU4 316 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 OR6B3Q8NGW1 331 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 ADAMTS14Q8WXS8 1223 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 FBXO32Q969P5 355 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 ZNF518BQ9C0D4 1074 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 SNX25Q9H3E2 840 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 CD248Q9HCU0 757 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 SPHK2Q9NRA0 654 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 PANK4Q9NVE7 773 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 SH3BP1Q9Y3L3 701 aa11.53□□□□□ -0.56
CBX3-205ENST00000462165 IGSF10Q6WRI0 2623 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 SH3BP5O60239 455 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 CST3P01034 146 aaPredicted RBP11.52□□□□□ -0.57
CBX3-205ENST00000462165 NEFLP07196 543 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 NDUFV2P19404 249 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 TXLNAP40222 546 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 TUBP50607 506 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 ANO4Q32M45 955 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 C10orf76Q5T2E6 689 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 HECTD3Q5T447 861 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 TMEM25Q86YD3 366 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 MIB1Q86YT6 1006 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 BBS7Q8IWZ6 715 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 TRIML1Q8N9V2 468 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 ZNF419Q96HQ0 510 aaPredicted RBP11.52□□□□□ -0.57
CBX3-205ENST00000462165 HSPA12BQ96MM6 686 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 CAMK1GQ96NX5 476 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 B3GNT5Q9BYG0 378 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 DPEP3Q9H4B8 488 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 FAM124BQ9H5Z6 455 aaPredicted RBP11.52□□□□□ -0.57
CBX3-205ENST00000462165 KIAA1586Q9HCI6 787 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 IL37Q9NZH6 218 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 SUSD2Q9UGT4 822 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 FBXO2Q9UK22 296 aaPredicted RBP11.52□□□□□ -0.57
CBX3-205ENST00000462165 SMC3Q9UQE7 1217 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 SRPRBQ9Y5M8 271 aaKnown RBP11.52□□□□□ -0.57
CBX3-205ENST00000462165 CLIC4Q9Y696 253 aa11.52□□□□□ -0.57
CBX3-205ENST00000462165 CLDN5O00501 218 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 TRIM24O15164 1050 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 ZBTB24O43167 697 aaPredicted RBP11.51□□□□□ -0.57
CBX3-205ENST00000462165 STAU1O95793 577 aaKnown RBP11.51□□□□□ -0.57
CBX3-205ENST00000462165 ZDHHC11BP0C7U3 371 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 FTH1P19P0C7X4 201 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 WASP42768 502 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 PLEKHG6Q3KR16 790 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 EGFLAMQ63HQ2 1017 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 GRAMD4Q6IC98 578 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 SDE2Q6IQ49 451 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 CCDC73Q6ZRK6 1079 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 RGL4Q8IZJ4 473 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 B3GALNT2Q8NCR0 500 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 IPO4Q8TEX9 1081 aaKnown RBP11.51□□□□□ -0.57
CBX3-205ENST00000462165 WBP2Q969T9 261 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 ACOX2Q99424 681 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 GABRG3Q99928 467 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 CCSER2Q9H7U1 834 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 COMMD8Q9NX08 183 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 HSPBP1Q9NZL4 362 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 CHORDC1Q9UHD1 332 aaPredicted RBP11.51□□□□□ -0.57
CBX3-205ENST00000462165 CYP8B1Q9UNU6 501 aa11.51□□□□□ -0.57
CBX3-205ENST00000462165 PCDHB9Q9Y5E1 797 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms