RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 HOXA6P31267 233 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 ASPAP45381 313 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 PXNP49023 591 aaPredicted RBP9.36□□□□□ -0.91
LDB1-203ENST00000461873 MRPS21P82921 87 aaKnown RBP9.36□□□□□ -0.91
LDB1-203ENST00000461873 LRRC63Q05C16 580 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 GAS6Q14393 721 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 DMC1Q14565 340 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 E2F5Q15329 346 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 RSPO4Q2I0M5 234 aaPredicted RBP9.36□□□□□ -0.91
LDB1-203ENST00000461873 AASDHQ4L235 1098 aaPredicted RBP9.36□□□□□ -0.91
LDB1-203ENST00000461873 EOGTQ5NDL2 527 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 C10orf120Q5SQS8 335 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 IL31Q6EBC2 164 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 SYT13Q7L8C5 426 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 CREBRFQ8IUR6 639 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 SMYD4Q8IYR2 804 aaPredicted RBP9.36□□□□□ -0.91
LDB1-203ENST00000461873 ADGRG2Q8IZP9 1017 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 FUKQ8N0W3 1084 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 C12orf29Q8N999 325 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 TAS1R2Q8TE23 839 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 GAB3Q8WWW8 586 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 ELMO3Q96BJ8 720 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 TMEM176AQ96HP8 235 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 SPACA7Q96KW9 195 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 TIGD1Q96MW7 591 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 HHIPQ96QV1 700 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 HNRNPABQ99729 332 aaKnown RBP9.36□□□□□ -0.91
LDB1-203ENST00000461873 GOLPH3LQ9H4A5 285 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 FAM124BQ9H5Z6 455 aaPredicted RBP9.36□□□□□ -0.91
LDB1-203ENST00000461873 PNPLA8Q9NP80 782 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 ARHGEF4Q9NR80 690 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 DEC1Q9P2X7 70 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 ARMCX3Q9UH62 379 aaPredicted RBP9.36□□□□□ -0.91
LDB1-203ENST00000461873 NAGPAQ9UK23 515 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 STRIP2Q9ULQ0 834 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 ZNF510Q9Y2H8 683 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 COL4A2P08572 1712 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 OTOL1A6NHN0 477 aaPredicted RBP9.35□□□□□ -0.91
LDB1-203ENST00000461873 K7ESF4 209 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 SCAMP3O14828 347 aaKnown RBP9.35□□□□□ -0.91
LDB1-203ENST00000461873 HRO43593 1189 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 KAT7O95251 611 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 CYBBP04839 570 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 CD19P15391 556 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 TBXAS1P24557 533 aaPredicted RBP9.35□□□□□ -0.91
LDB1-203ENST00000461873 TIE1P35590 1138 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 EIF2DP41214 584 aaKnown RBP9.35□□□□□ -0.91
LDB1-203ENST00000461873 GRIA2P42262 883 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 PRCPP42785 496 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 PLA2G4AP47712 749 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 CACNA2D1P54289 1103 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 PPP3CAQ08209 521 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 INCA1Q0VD86 236 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 HSF5Q4G112 596 aaPredicted RBP9.35□□□□□ -0.91
LDB1-203ENST00000461873 KLHL10Q6JEL2 608 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 FMR1NBQ8N0W7 255 aaPredicted RBP9.35□□□□□ -0.91
LDB1-203ENST00000461873 DDX1Q92499 740 aaKnown RBP9.35□□□□□ -0.91
LDB1-203ENST00000461873 GOLGA1Q92805 767 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 EEF2KMTQ96G04 330 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 DHTKD1Q96HY7 919 aaPredicted RBP9.35□□□□□ -0.91
LDB1-203ENST00000461873 LOXL4Q96JB6 756 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 SMOQ99835 787 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 RTKNQ9BST9 563 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 DUSP16Q9BY84 665 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 SDCBP2Q9H190 292 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 CCSER2Q9H7U1 834 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 LRRC4Q9HBW1 653 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 CISHQ9NSE2 258 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 SEMA4GQ9NTN9 838 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 CHMP5Q9NZZ3 219 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 WDR35Q9P2L0 1181 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 DNMT3LQ9UJW3 386 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 SCML2Q9UQR0 700 aa9.35□□□□□ -0.91
LDB1-203ENST00000461873 MYO16Q9Y6X6 1858 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.34□□□□□ -0.91
LDB1-203ENST00000461873 NEDD8-MDP1E9PL57 170 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 CILPO75339 1184 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 GNA14O95837 355 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 OLFM2O95897 454 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 CYP17A1P05093 508 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 TDGF1P13385 188 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 RARGP13631 454 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 CHKAP35790 457 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 TNFRSF4P43489 277 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 COG7P83436 770 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 ARID5AQ03989 594 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 KDSRQ06136 332 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 DMWDQ09019 674 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 SRSF5Q13243 272 aaKnown RBP9.34□□□□□ -0.91
LDB1-203ENST00000461873 CSRP2Q16527 193 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 SGO2Q562F6 1265 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 LY6G5CQ5SRR4 150 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 SNX30Q5VWJ9 437 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 ANKRD40Q6AI12 368 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 ISM2Q6H9L7 571 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 GRAMD4Q6IC98 578 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 ANO7Q6IWH7 933 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 CLEC20AQ6ZU45 233 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 MIB1Q86YT6 1006 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 SIX6OS1Q8N1H7 587 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms