RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.52□□□□□ -1.85
HDAC6-212ENST00000461608 FZD1Q9UP38 647 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 USP22Q9UPT9 525 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 HS3ST4Q9Y661 456 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 A8MVJ9 347 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 hCG_1984214I3L0E3 225 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 FCHO1O14526 889 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 PCDH17O14917 1159 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 PLSCR1O15162 318 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 SLC16A3O15427 465 aaKnown RBP3.51□□□□□ -1.85
HDAC6-212ENST00000461608 ACTL6BO94805 426 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 ADH4P08319 380 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 ARP10275 920 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 UQCRC1P31930 480 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 DGKQP52824 942 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 SUMO2P61956 95 aaKnown RBP3.51□□□□□ -1.85
HDAC6-212ENST00000461608 RESTQ13127 1097 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 POSTNQ15063 836 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 LSM12Q3MHD2 195 aaKnown RBP3.51□□□□□ -1.85
HDAC6-212ENST00000461608 ARHGAP15Q53QZ3 475 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 NFRKBQ6P4R8 1299 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 GGT6Q6P531 493 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 CYP26C1Q6V0L0 522 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 ARHGEF19Q8IW93 802 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 SLC44A2Q8IWA5 706 aaPredicted RBP3.51□□□□□ -1.85
HDAC6-212ENST00000461608 IZUMO1Q8IYV9 350 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 LNX2Q8N448 690 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 NAXEQ8NCW5 288 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 IL17REQ8NFR9 667 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 OR6Y1Q8NGX8 325 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 NEU4Q8WWR8 484 aaPredicted RBP3.51□□□□□ -1.85
HDAC6-212ENST00000461608 SOCS4Q8WXH5 440 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 ATG4AQ8WYN0 398 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 RUBCNQ92622 972 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 LENG9Q96B70 501 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 TBC1D20Q96BZ9 403 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 TTPALQ9BTX7 342 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 DDX23Q9BUQ8 820 aaKnown RBP3.51□□□□□ -1.85
HDAC6-212ENST00000461608 SORBS1Q9BX66 1292 aaKnown RBP3.51□□□□□ -1.85
HDAC6-212ENST00000461608 ACTRT3Q9BYD9 372 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 NDUFAF4Q9P032 175 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 KIF17Q9P2E2 1029 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 NKX1-2Q9UD57 310 aaPredicted RBP3.51□□□□□ -1.85
HDAC6-212ENST00000461608 SERTAD3Q9UJW9 196 aa3.51□□□□□ -1.85
HDAC6-212ENST00000461608 C19orf53Q9UNZ5 99 aaPredicted RBP3.51□□□□□ -1.85
HDAC6-212ENST00000461608 MRPS17Q9Y2R5 130 aaKnown RBP3.51□□□□□ -1.85
HDAC6-212ENST00000461608 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.51□□□□□ -1.85
HDAC6-212ENST00000461608 CCDC196A0A1B0GTZ2 297 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 IPO5O00410 1097 aaKnown RBP3.5□□□□□ -1.85
HDAC6-212ENST00000461608 KIAA0355O15063 1070 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 ZSCAN9O15535 394 aaPredicted RBP3.5□□□□□ -1.85
HDAC6-212ENST00000461608 ORC4O43929 436 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 LPXNO60711 386 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 FAM155BO75949 473 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 ZFPL1O95159 310 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 TNFRSF6BO95407 300 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 LARGE1O95461 756 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 PRKCBP05771 671 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 ANXA6P08133 673 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 DLDP09622 509 aaKnown RBP3.5□□□□□ -1.85
HDAC6-212ENST00000461608 SRGAP2BP0DMP2 458 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 PPP3CBP16298 524 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 MAPK9P45984 424 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 GATMP50440 423 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 TIRAPP58753 221 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 DGCR2P98153 550 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 TBX2Q13207 712 aaPredicted RBP3.5□□□□□ -1.85
HDAC6-212ENST00000461608 KCNAB1Q14722 419 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 TIGD2Q4W5G0 525 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 MIIPQ5JXC2 388 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 TMEM63BQ5T3F8 832 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 ABHD17BQ5VST6 288 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 SULT6B1Q6IMI4 303 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 RINT1Q6NUQ1 792 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 MTHFD1LQ6UB35 978 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 USP49Q70CQ1 688 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 KCTD20Q7Z5Y7 419 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 C1orf210Q8IVY1 113 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 CLASRPQ8N2M8 674 aaKnown RBP3.5□□□□□ -1.85
HDAC6-212ENST00000461608 FSTL5Q8N475 847 aaPredicted RBP3.5□□□□□ -1.85
HDAC6-212ENST00000461608 SSH3Q8TE77 659 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 CPT1BQ92523 772 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 NACC2Q96BF6 587 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 VPS50Q96JG6 964 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 PBKQ96KB5 322 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 UBXN10Q96LJ8 280 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 FAM167BQ9BTA0 163 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 MAF1Q9H063 256 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 PABPC3Q9H361 631 aaKnown RBP3.5□□□□□ -1.85
HDAC6-212ENST00000461608 UNC45AQ9H3U1 944 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 GBA2Q9HCG7 927 aaPredicted RBP3.5□□□□□ -1.85
HDAC6-212ENST00000461608 RRN3Q9NYV6 651 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 EHD3Q9NZN3 535 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 VSX1Q9NZR4 365 aaPredicted RBP3.5□□□□□ -1.85
HDAC6-212ENST00000461608 CEP72Q9P209 647 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 DKK2Q9UBU2 259 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 SRP68Q9UHB9 627 aaKnown RBP3.5□□□□□ -1.85
HDAC6-212ENST00000461608 SLC13A4Q9UKG4 626 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 RIMKLBQ9ULI2 386 aa3.5□□□□□ -1.85
HDAC6-212ENST00000461608 DRG1Q9Y295 367 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms