RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 TRIM5Q9C035 493 aa4.58□□□□□ -1.68
COL21A1-205ENST00000461489 ZNF518BQ9C0D4 1074 aa4.58□□□□□ -1.68
COL21A1-205ENST00000461489 NMRK2Q9NPI5 230 aa4.58□□□□□ -1.68
COL21A1-205ENST00000461489 FAM90A8PA6NJQ4 464 aa4.57□□□□□ -1.68
COL21A1-205ENST00000461489 B4DGG1 531 aa4.57□□□□□ -1.68
COL21A1-205ENST00000461489 PHGDHO43175 533 aaKnown RBP4.57□□□□□ -1.68
COL21A1-205ENST00000461489 FAM90A13PP0C7W8 464 aa4.57□□□□□ -1.68
COL21A1-205ENST00000461489 FAM90A24PP0C7X0 464 aa4.57□□□□□ -1.68
COL21A1-205ENST00000461489 TIRAPP58753 221 aa4.57□□□□□ -1.68
COL21A1-205ENST00000461489 SEMA3AQ14563 771 aa4.57□□□□□ -1.68
COL21A1-205ENST00000461489 SLC9C1Q4G0N8 1177 aa4.57□□□□□ -1.68
COL21A1-205ENST00000461489 SMRP1Q8NCR6 262 aa4.57□□□□□ -1.68
COL21A1-205ENST00000461489 NGDNQ8NEJ9 315 aaKnown RBP4.57□□□□□ -1.68
COL21A1-205ENST00000461489 SPSB4Q96A44 273 aa4.57□□□□□ -1.68
COL21A1-205ENST00000461489 ZBTB45Q96K62 511 aaPredicted RBP4.57□□□□□ -1.68
COL21A1-205ENST00000461489 LRGUKQ96M69 825 aa4.57□□□□□ -1.68
COL21A1-205ENST00000461489 TRMOQ9BU70 441 aa4.57□□□□□ -1.68
COL21A1-205ENST00000461489 FAM234AQ9H0X4 552 aa4.57□□□□□ -1.68
COL21A1-205ENST00000461489 SMURF2Q9HAU4 748 aa4.57□□□□□ -1.68
COL21A1-205ENST00000461489 A1CFQ9NQ94 594 aaKnown RBP4.57□□□□□ -1.68
COL21A1-205ENST00000461489 XPNPEP3Q9NQH7 507 aa4.57□□□□□ -1.68
COL21A1-205ENST00000461489 PAXBP1Q9Y5B6 917 aa4.57□□□□□ -1.68
COL21A1-205ENST00000461489 FER1L4A9Z1Z3 1794 aa4.57□□□□□ -1.68
COL21A1-205ENST00000461489 LOC102723971A0A1B0GUV8 181 aa4.56□□□□□ -1.68
COL21A1-205ENST00000461489 CLIC1O00299 241 aa4.56□□□□□ -1.68
COL21A1-205ENST00000461489 CD3EAPO15446 510 aaKnown RBP4.56□□□□□ -1.68
COL21A1-205ENST00000461489 MARCH6O60337 910 aa4.56□□□□□ -1.68
COL21A1-205ENST00000461489 CNOT3O75175 753 aaKnown RBP4.56□□□□□ -1.68
COL21A1-205ENST00000461489 TULP3O75386 442 aa4.56□□□□□ -1.68
COL21A1-205ENST00000461489 EN2P19622 333 aaPredicted RBP4.56□□□□□ -1.68
COL21A1-205ENST00000461489 SLC7A1P30825 629 aa4.56□□□□□ -1.68
COL21A1-205ENST00000461489 ITGA8P53708 1063 aa4.56□□□□□ -1.68
COL21A1-205ENST00000461489 NANOS2P60321 138 aaKnown RBP4.56□□□□□ -1.68
COL21A1-205ENST00000461489 YPEL5P62699 121 aa4.56□□□□□ -1.68
COL21A1-205ENST00000461489 CFHR3Q02985 330 aa4.56□□□□□ -1.68
COL21A1-205ENST00000461489 MFSD13AQ14CX5 517 aa4.56□□□□□ -1.68
COL21A1-205ENST00000461489 KCTD20Q7Z5Y7 419 aa4.56□□□□□ -1.68
COL21A1-205ENST00000461489 OR56A3Q8NH54 315 aa4.56□□□□□ -1.68
COL21A1-205ENST00000461489 WDYHV1Q96HA8 205 aa4.56□□□□□ -1.68
COL21A1-205ENST00000461489 ZFYVE19Q96K21 471 aa4.56□□□□□ -1.68
COL21A1-205ENST00000461489 HIPK2Q9H2X6 1198 aa4.56□□□□□ -1.68
COL21A1-205ENST00000461489 TRIM36Q9NQ86 728 aa4.56□□□□□ -1.68
COL21A1-205ENST00000461489 GAR1Q9NY12 217 aaKnown RBP4.56□□□□□ -1.68
COL21A1-205ENST00000461489 DNMT3BQ9UBC3 853 aaKnown RBP4.56□□□□□ -1.68
COL21A1-205ENST00000461489 PNMA8BQ9ULN7 279 aaPredicted RBP4.56□□□□□ -1.68
COL21A1-205ENST00000461489 H7C4K7 107 aa4.55□□□□□ -1.68
COL21A1-205ENST00000461489 EXOC5O00471 708 aa4.55□□□□□ -1.68
COL21A1-205ENST00000461489 TOMM40O96008 361 aa4.55□□□□□ -1.68
COL21A1-205ENST00000461489 ATF7P17544 494 aaPredicted RBP4.55□□□□□ -1.68
COL21A1-205ENST00000461489 TACR3P29371 465 aa4.55□□□□□ -1.68
COL21A1-205ENST00000461489 CPA2P48052 419 aa4.55□□□□□ -1.68
COL21A1-205ENST00000461489 TIAL1Q01085 375 aaKnown RBP eCLIP4.55□□□□□ -1.68
COL21A1-205ENST00000461489 SLC14A1Q13336 389 aa4.55□□□□□ -1.68
COL21A1-205ENST00000461489 STIM1Q13586 685 aa4.55□□□□□ -1.68
COL21A1-205ENST00000461489 NPY5RQ15761 445 aa4.55□□□□□ -1.68
COL21A1-205ENST00000461489 LVRNQ6Q4G3 990 aa4.55□□□□□ -1.68
COL21A1-205ENST00000461489 THOC3Q96J01 351 aaKnown RBP4.55□□□□□ -1.68
COL21A1-205ENST00000461489 HIC2Q96JB3 615 aa4.55□□□□□ -1.68
COL21A1-205ENST00000461489 ACO2Q99798 780 aaKnown RBP4.55□□□□□ -1.68
COL21A1-205ENST00000461489 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.54□□□□□ -1.68
COL21A1-205ENST00000461489 CCP110O43303 1012 aa4.54□□□□□ -1.68
COL21A1-205ENST00000461489 RASSF9O75901 435 aa4.54□□□□□ -1.68
COL21A1-205ENST00000461489 HGFP14210 728 aa4.54□□□□□ -1.68
COL21A1-205ENST00000461489 PTDSS1P48651 473 aaKnown RBP4.54□□□□□ -1.68
COL21A1-205ENST00000461489 GATMP50440 423 aa4.54□□□□□ -1.68
COL21A1-205ENST00000461489 PGDP52209 483 aa4.54□□□□□ -1.68
COL21A1-205ENST00000461489 HSF1Q00613 529 aa4.54□□□□□ -1.68
COL21A1-205ENST00000461489 MTX1Q13505 466 aa4.54□□□□□ -1.68
COL21A1-205ENST00000461489 ERV3-1Q14264 604 aa4.54□□□□□ -1.68
COL21A1-205ENST00000461489 PFKFB3Q16875 520 aaPredicted RBP4.54□□□□□ -1.68
COL21A1-205ENST00000461489 ZNF750Q32MQ0 723 aa4.54□□□□□ -1.68
COL21A1-205ENST00000461489 ANO6Q4KMQ2 910 aa4.54□□□□□ -1.68
COL21A1-205ENST00000461489 DAB2IPQ5VWQ8 1189 aa4.54□□□□□ -1.68
COL21A1-205ENST00000461489 COL23A1Q86Y22 540 aaPredicted RBP4.54□□□□□ -1.68
COL21A1-205ENST00000461489 C12orf76Q8N812 135 aaPredicted RBP4.54□□□□□ -1.68
COL21A1-205ENST00000461489 IL31RAQ8NI17 732 aa4.54□□□□□ -1.68
COL21A1-205ENST00000461489 MPLKIPQ8TAP9 179 aa4.54□□□□□ -1.68
COL21A1-205ENST00000461489 MAML1Q92585 1016 aa4.54□□□□□ -1.68
COL21A1-205ENST00000461489 AIFM3Q96NN9 605 aa4.54□□□□□ -1.68
COL21A1-205ENST00000461489 RHOBTB2Q9BYZ6 727 aa4.54□□□□□ -1.68
COL21A1-205ENST00000461489 USP29Q9HBJ7 922 aa4.54□□□□□ -1.68
COL21A1-205ENST00000461489 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.54□□□□□ -1.68
COL21A1-205ENST00000461489 MBD3L4A6NDZ8 208 aaPredicted RBP4.53□□□□□ -1.68
COL21A1-205ENST00000461489 MBD3L3A6NE82 208 aaPredicted RBP4.53□□□□□ -1.68
COL21A1-205ENST00000461489 PYCARD-AS1I3L0S3 204 aa4.53□□□□□ -1.68
COL21A1-205ENST00000461489 TBX3O15119 743 aa4.53□□□□□ -1.68
COL21A1-205ENST00000461489 SMAD6O43541 496 aaKnown RBP4.53□□□□□ -1.68
COL21A1-205ENST00000461489 RRP9O43818 475 aaKnown RBP4.53□□□□□ -1.68
COL21A1-205ENST00000461489 PIAS2O75928 621 aa4.53□□□□□ -1.68
COL21A1-205ENST00000461489 MYBP10242 640 aa4.53□□□□□ -1.68
COL21A1-205ENST00000461489 CD19P15391 556 aa4.53□□□□□ -1.68
COL21A1-205ENST00000461489 MCM5P33992 734 aa4.53□□□□□ -1.68
COL21A1-205ENST00000461489 AGFG1P52594 562 aaKnown RBP4.53□□□□□ -1.68
COL21A1-205ENST00000461489 ZNF549Q6P9A3 640 aa4.53□□□□□ -1.68
COL21A1-205ENST00000461489 B3GNT9Q6UX72 402 aa4.53□□□□□ -1.68
COL21A1-205ENST00000461489 NPNTQ6UXI9 565 aa4.53□□□□□ -1.68
COL21A1-205ENST00000461489 ZNF793Q6ZN11 406 aa4.53□□□□□ -1.68
COL21A1-205ENST00000461489 CHPFQ8IZ52 775 aa4.53□□□□□ -1.68
COL21A1-205ENST00000461489 ZBTB34Q8NCN2 500 aa4.53□□□□□ -1.68
COL21A1-205ENST00000461489 SLC35G2Q8TBE7 412 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms