RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 RNF43Q68DV7 783 aa16.01■□□□□ 0.15
COL16A1-206ENST00000461217 SASS6Q6UVJ0 657 aa16.01■□□□□ 0.15
COL16A1-206ENST00000461217 ALLCQ8N6M5 410 aa16.01■□□□□ 0.15
COL16A1-206ENST00000461217 SCAMP5Q8TAC9 235 aa16.01■□□□□ 0.15
COL16A1-206ENST00000461217 CNOT6LQ96LI5 555 aaKnown RBP16.01■□□□□ 0.15
COL16A1-206ENST00000461217 EDEM2Q9BV94 578 aa16.01■□□□□ 0.15
COL16A1-206ENST00000461217 SDCBP2Q9H190 292 aa16.01■□□□□ 0.15
COL16A1-206ENST00000461217 E2F8A0AVK6 867 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 SYCE3A1L190 88 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16■□□□□ 0.15
COL16A1-206ENST00000461217 VNN1O95497 513 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 NR3C1P04150 777 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 CCDC130P13994 396 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 PIK3CAP42336 1068 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 ZNF445P59923 1031 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 DLG4P78352 724 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 GAD2Q05329 585 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 LY6G5CQ5SRR4 150 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 PMS2CLQ68D20 193 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 RHBDF2Q6PJF5 856 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 RASSF3Q86WH2 238 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 C12orf40Q86WS4 652 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 FUKQ8N0W3 1084 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 TXNDC5Q8NBS9 432 aaKnown RBP16■□□□□ 0.15
COL16A1-206ENST00000461217 MDGA1Q8NFP4 955 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 CCDC47Q96A33 483 aaKnown RBP16■□□□□ 0.15
COL16A1-206ENST00000461217 OTUB2Q96DC9 234 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 CCSER2Q9H7U1 834 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 POLMQ9NP87 494 aaPredicted RBP16■□□□□ 0.15
COL16A1-206ENST00000461217 FAM49BQ9NUQ9 324 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 GMIPQ9P107 970 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 KIAA1468Q9P260 1216 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 BCCIPQ9P287 314 aaKnown RBP eCLIP16■□□□□ 0.15
COL16A1-206ENST00000461217 FRMD4BQ9Y2L6 1034 aa16■□□□□ 0.15
COL16A1-206ENST00000461217 BCLAF3A2AJT9 711 aaKnown RBP15.99■□□□□ 0.15
COL16A1-206ENST00000461217 PDXKO00764 312 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 RPN1P04843 607 aaKnown RBP15.99■□□□□ 0.15
COL16A1-206ENST00000461217 GRIA2P42262 883 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 DHPSP49366 369 aaPredicted RBP15.99■□□□□ 0.15
COL16A1-206ENST00000461217 NDST1P52848 882 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 CLDN10P78369 228 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 ANO4Q32M45 955 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 EOGTQ5NDL2 527 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 PAQR9Q6ZVX9 377 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 CYP2U1Q7Z449 544 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 SLC9A9Q8IVB4 645 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 SFTPA1Q8IWL2 248 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 PGBD3Q8N328 593 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 NAT16Q8N8M0 369 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 SLC2A14Q8TDB8 520 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 SMARCE1Q969G3 411 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 JAKMIP2Q96AA8 810 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 SPACA7Q96KW9 195 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 IMPG2Q9BZV3 1241 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 KCTD10Q9H3F6 313 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 ZDHHC4Q9NPG8 344 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 DMAC2Q9NW81 257 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 COMMD8Q9NX08 183 aa15.99■□□□□ 0.15
COL16A1-206ENST00000461217 NCOR2Q9Y618 2525 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 SGK1O00141 431 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 TNFRSF10BO14763 440 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 CALUO43852 315 aaPredicted RBP15.98■□□□□ 0.15
COL16A1-206ENST00000461217 KIF20AO95235 890 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 BCKDHBP21953 392 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 ADORA2BP29275 332 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 TUBP50607 506 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 MAP3K7CLP57077 242 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 MESP2Q0VG99 397 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 PNOCQ13519 176 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 ZACNQ401N2 412 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 HSF5Q4G112 596 aaPredicted RBP15.98■□□□□ 0.15
COL16A1-206ENST00000461217 EMC10Q5UCC4 262 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 SPOPLQ6IQ16 392 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 LRSAM1Q6UWE0 723 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 TMEM92Q6UXU6 159 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 SV2AQ7L0J3 742 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 BBS7Q8IWZ6 715 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 IL17RCQ8NAC3 791 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 TMC2Q8TDI7 906 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 WHAMMQ8TF30 809 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 TAF4BQ92750 862 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 ZFRQ96KR1 1074 aaKnown RBP15.98■□□□□ 0.15
COL16A1-206ENST00000461217 SMOQ99835 787 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 GTPBP4Q9BZE4 634 aaKnown RBP15.98■□□□□ 0.15
COL16A1-206ENST00000461217 FBXO44Q9H4M3 255 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.98■□□□□ 0.15
COL16A1-206ENST00000461217 TLR8Q9NR97 1041 aaKnown RBP15.98■□□□□ 0.15
COL16A1-206ENST00000461217 RMND1Q9NWS8 449 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 HMGXB4Q9UGU5 601 aa15.98■□□□□ 0.15
COL16A1-206ENST00000461217 SPAG17Q6Q759 2223 aa15.97■□□□□ 0.15
COL16A1-206ENST00000461217 TBC1D3BA6NDS4 549 aa15.97■□□□□ 0.15
COL16A1-206ENST00000461217 KHNYNO15037 678 aaKnown RBP15.97■□□□□ 0.15
COL16A1-206ENST00000461217 MAP3K13O43283 966 aa15.97■□□□□ 0.15
COL16A1-206ENST00000461217 TLR5O60602 858 aa15.97■□□□□ 0.15
COL16A1-206ENST00000461217 BEST1O76090 585 aa15.97■□□□□ 0.15
COL16A1-206ENST00000461217 HLA-DRAP01903 254 aa15.97■□□□□ 0.15
COL16A1-206ENST00000461217 FAM200BP0CF97 657 aa15.97■□□□□ 0.15
COL16A1-206ENST00000461217 HNRNPLP14866 589 aaKnown RBP eCLIP15.97■□□□□ 0.15
COL16A1-206ENST00000461217 PREPLQ4J6C6 727 aaPredicted RBP15.97■□□□□ 0.15
COL16A1-206ENST00000461217 N4BP2L1Q5TBK1 243 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms