RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 ZNF771Q7L3S4 317 aaPredicted RBP5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 CATIPQ7Z7H3 387 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 PHYKPLQ8IUZ5 450 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 FANCBQ8NB91 859 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 GPRC5AQ8NFJ5 357 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 MYRIPQ8NFW9 859 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 PJA1Q8NG27 643 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 LPAR1Q92633 364 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 TACO1Q9BSH4 297 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 TM6SF1Q9BZW5 370 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 SPATC1LQ9H0A9 340 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 QRSL1Q9H0R6 528 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 CSRNP2Q9H175 543 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 PCED1AQ9H1Q7 454 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 SH2D4AQ9H788 454 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 SLC38A10Q9HBR0 1119 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 MAN1C1Q9NR34 630 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 MORF4L1Q9UBU8 362 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 DDX20Q9UHI6 824 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 USP25Q9UHP3 1055 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 FEM1BQ9UK73 627 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 NOL7Q9UMY1 257 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 ADAMTS5Q9UNA0 930 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 EDARQ9UNE0 448 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 TRIM17Q9Y577 477 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 GPR45Q9Y5Y3 372 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 LCTP09848 1927 aa5.35□□□□□ -1.55
ATPAF1-203ENST00000460928 ASTN1O14525 1302 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 A0A1W2PPC1 479 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 TNPO2O14787 897 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 PSMA5P28066 241 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 HOXA13P31271 388 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 LIFRP42702 1097 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 FLT3LGP49771 235 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 METAP2P50579 478 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 GTF2A1P52655 376 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 MANFP55145 182 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 ASPRV1Q53RT3 343 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 COBLL1Q53SF7 1204 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 PRAMEF19Q5SWL8 479 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 TMEM63BQ5T3F8 832 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 ICE2Q659A1 982 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 B3GNT9Q6UX72 402 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 BTNL9Q6UXG8 535 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 SLC30A10Q6XR72 485 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 TMTC3Q6ZXV5 915 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 GPR155Q7Z3F1 870 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 KCNK18Q7Z418 384 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 GPR142Q7Z601 462 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 SGMS1Q86VZ5 419 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 MIER2Q8N344 545 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 C7orf31Q8N865 590 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 ERCC4Q92889 916 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 PGBD1Q96JS3 809 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 GNRHR2Q96P88 292 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 GBP4Q96PP9 640 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 SLC2A13Q96QE2 648 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 UIMC1Q96RL1 719 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 AGXT2Q9BYV1 514 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 RANBP17Q9H2T7 1088 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 C1orf112Q9NSG2 853 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 RNF146Q9NTX7 359 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 HOXC10Q9NYD6 342 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 OGFRQ9NZT2 677 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 FLRT1Q9NZU1 646 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 COL20A1Q9P218 1284 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 GJD2Q9UKL4 321 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 CCPG1Q9ULG6 757 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 SLC45A1Q9Y2W3 748 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 RABGAP1Q9Y3P9 1069 aa5.34□□□□□ -1.55
ATPAF1-203ENST00000460928 WDR19Q8NEZ3 1342 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 PRSS38A1L453 326 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 GOLGA6L6A8MZA4 724 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 GOLGA6L22H0YM25 854 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 OVOL3O00110 214 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 CTAGE5O15320 804 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 ZBED4O75132 1171 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 NDUFS2O75306 463 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 POU2F2P09086 479 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 OSMP13725 252 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 C5AR1P21730 350 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 CALML3P27482 149 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 ADORA2AP29274 412 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 GCLCP48506 637 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 NEK3P51956 506 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 ADKP55263 362 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 UBXN2AP68543 259 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 MRPS9P82933 396 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 DBPQ10586 325 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 TOP3AQ13472 1001 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 BAATQ14032 418 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 PRKD1Q15139 912 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 SAFBQ15424 915 aaKnown RBP eCLIP5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 UBE2SQ16763 222 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 FAM110CQ1W6H9 321 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 CCDC178Q5BJE1 867 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 ANO1Q5XXA6 986 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 IL31Q6EBC2 164 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms