RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 CYP2W1Q8TAV3 490 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 CCDC12Q8WUD4 166 aaPredicted RBP5.46□□□□□ -1.54
SF3A3-202ENST00000460925 TNPO1Q92973 898 aaKnown RBP5.46□□□□□ -1.54
SF3A3-202ENST00000460925 PAWRQ96IZ0 340 aaKnown RBP5.46□□□□□ -1.54
SF3A3-202ENST00000460925 ZNF396Q96N95 335 aaPredicted RBP5.46□□□□□ -1.54
SF3A3-202ENST00000460925 ACO2Q99798 780 aaKnown RBP5.46□□□□□ -1.54
SF3A3-202ENST00000460925 TMEM60Q9H2L4 133 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 BCAS3Q9H6U6 928 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 ZNF552Q9H707 407 aaPredicted RBP5.46□□□□□ -1.54
SF3A3-202ENST00000460925 C6orf50Q9HD87 102 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 PXMP2Q9NR77 195 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 RTEL1Q9NZ71 1219 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 CHMP5Q9NZZ3 219 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 FTSJ1Q9UET6 329 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 USP25Q9UHP3 1055 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 IPPQ9Y573 584 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 CLIC4Q9Y696 253 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 RPTORQ8N122 1335 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 FAM86B1E9PN63 330 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 FIBPO43427 364 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 NRP2O60462 931 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 CCNT1O60563 726 aaKnown RBP5.45□□□□□ -1.54
SF3A3-202ENST00000460925 TUSC2O75896 110 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 SEC24DO94855 1032 aaPredicted RBP5.45□□□□□ -1.54
SF3A3-202ENST00000460925 PCDH8O95206 1070 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 C8BP07358 591 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 GLI1P08151 1106 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 FAM86B2P0C5J1 330 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 HSPA8P11142 646 aaKnown RBP5.45□□□□□ -1.54
SF3A3-202ENST00000460925 FCER1AP12319 257 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 RHCEP18577 417 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 EDNRBP24530 442 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 U2AF2P26368 475 aaKnown RBP eCLIP5.45□□□□□ -1.542e-6■■□□□ 11.5
SF3A3-202ENST00000460925 GNA11P29992 359 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 MAPK4P31152 587 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 CASQ1P31415 396 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 MCM7P33993 719 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 SREBF1P36956 1147 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 CCNA1P78396 465 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 CDK17Q00537 523 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 RHDQ02161 417 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 LRP8Q14114 963 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 MORC3Q14149 939 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 KCTD2Q14681 263 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 PGM5Q15124 567 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 NONOQ15233 471 aaKnown RBP eCLIP5.45□□□□□ -1.54
SF3A3-202ENST00000460925 LONRF1Q17RB8 773 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 SKIDA1Q1XH10 827 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 UAP1L1Q3KQV9 507 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 HSP90B2PQ58FF3 399 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 PRAMEF19Q5SWL8 479 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 ARHGEF16Q5VV41 709 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 C16orf87Q6PH81 154 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 ABI1Q8IZP0 508 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 PDILTQ8N807 584 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 FAM133AQ8N9E0 248 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 SHCBP1Q8NEM2 672 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 GAB3Q8WWW8 586 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 USP28Q96RU2 1077 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 RMDN3Q96TC7 470 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 PDCD2LQ9BRP1 358 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 FOXP1Q9H334 677 aaPredicted RBP5.45□□□□□ -1.54
SF3A3-202ENST00000460925 FAM204AQ9H8W3 233 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 EVLQ9UI08 416 aaPredicted RBP5.45□□□□□ -1.54
SF3A3-202ENST00000460925 CNPY2Q9Y2B0 182 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 MYH9P35579 1960 aaKnown RBP5.45□□□□□ -1.54
SF3A3-202ENST00000460925 PFASO15067 1338 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 FRMPD4Q14CM0 1322 aa5.45□□□□□ -1.54
SF3A3-202ENST00000460925 ARID2Q68CP9 1835 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.44□□□□□ -1.54
SF3A3-202ENST00000460925 SLC15A5A6NIM6 579 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 A6NNZ2 444 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 DDX39AO00148 427 aaKnown RBP5.44□□□□□ -1.54
SF3A3-202ENST00000460925 ADCY6O43306 1168 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 HTRA2O43464 458 aaPredicted RBP5.44□□□□□ -1.54
SF3A3-202ENST00000460925 MTA2O94776 668 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 ARIH2O95376 493 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 IL18BPO95998 194 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 ARP10275 920 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 KCNA2P16389 499 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 CD53P19397 219 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 MARCKSP29966 332 aaPredicted RBP5.44□□□□□ -1.54
SF3A3-202ENST00000460925 VIPR1P32241 457 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 HTR3AP46098 478 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 CLK1P49759 484 aaKnown RBP5.44□□□□□ -1.54
SF3A3-202ENST00000460925 FLT3LGP49771 235 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 MRPL12P52815 198 aaKnown RBP5.44□□□□□ -1.54
SF3A3-202ENST00000460925 LBX1P52954 281 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 ZNF200P98182 395 aaPredicted RBP5.44□□□□□ -1.54
SF3A3-202ENST00000460925 SP4Q02446 784 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 GHRHRQ02643 423 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 TARBP2Q15633 366 aaKnown RBP5.44□□□□□ -1.54
SF3A3-202ENST00000460925 PGS1Q32NB8 556 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 COBLL1Q53SF7 1204 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 PRR16Q569H4 304 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 SPECC1Q5M775 1068 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 ANO1Q5XXA6 986 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 KLHL10Q6JEL2 608 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 CD300LDQ6UXZ3 194 aa5.44□□□□□ -1.54
SF3A3-202ENST00000460925 ARMCX2Q7L311 632 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms