RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 OLA1Q9NTK5 396 aaKnown RBP3.36□□□□□ -1.87
HPS3-203ENST00000460822 ETAA1Q9NY74 926 aa3.36□□□□□ -1.87
HPS3-203ENST00000460822 AASSQ9UDR5 926 aa3.36□□□□□ -1.87
HPS3-203ENST00000460822 ING1Q9UK53 422 aaPredicted RBP3.36□□□□□ -1.87
HPS3-203ENST00000460822 ARHGAP26Q9UNA1 814 aa3.36□□□□□ -1.87
HPS3-203ENST00000460822 HDAC5Q9UQL6 1122 aa3.36□□□□□ -1.87
HPS3-203ENST00000460822 WDR33Q9C0J8 1336 aaKnown RBP3.35□□□□□ -1.87
HPS3-203ENST00000460822 PRR5-ARHGAP8B1AHC4 643 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 RGS10O43665 173 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 NARSO43776 548 aaKnown RBP3.35□□□□□ -1.87
HPS3-203ENST00000460822 KRT38O76015 456 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 ANXA6P08133 673 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 ATXN1LP0C7T5 689 aaKnown RBP3.35□□□□□ -1.87
HPS3-203ENST00000460822 SCNN1GP51170 649 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 NUCB1Q02818 461 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 CHRNDQ07001 517 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 SLFN5Q08AF3 891 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 PRKG2Q13237 762 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 CSRP2Q16527 193 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 MAP3K21Q5TCX8 1036 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 ICE2Q659A1 982 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 EFCAB12Q6NXP0 572 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 TAPT1Q6NXT6 567 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 NFRKBQ6P4R8 1299 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 DOK3Q7L591 496 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 RAB11FIP2Q7L804 512 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 TMEM57Q8N5G2 664 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 PSD4Q8NDX1 1056 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 FAM227BQ96M60 508 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 TRIB1Q96RU8 372 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 SMOQ99835 787 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 CHCHD6Q9BRQ6 235 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 CENPOQ9BU64 300 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 AGXT2Q9BYV1 514 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 GPR63Q9BZJ6 419 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 TWSG1Q9GZX9 223 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 BRD8Q9H0E9 1235 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 SMOC2Q9H3U7 446 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 ELAC1Q9H777 363 aaKnown RBP3.35□□□□□ -1.87
HPS3-203ENST00000460822 MMRN2Q9H8L6 949 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 TMOD4Q9NZQ9 345 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 POGKQ9P215 609 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 HECAQ9UBI9 543 aaPredicted RBP3.35□□□□□ -1.87
HPS3-203ENST00000460822 SHOC2Q9UQ13 582 aa3.35□□□□□ -1.87
HPS3-203ENST00000460822 MRPS17Q9Y2R5 130 aaKnown RBP3.35□□□□□ -1.87
HPS3-203ENST00000460822 K7ENM7 598 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 ZSCAN9O15535 394 aaPredicted RBP3.34□□□□□ -1.87
HPS3-203ENST00000460822 CCNT2O60583 730 aaKnown RBP3.34□□□□□ -1.87
HPS3-203ENST00000460822 PPP6R2O75170 966 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 RPS6KA4O75676 772 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 GFPT2O94808 682 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 DDX58O95786 925 aaKnown RBP3.34□□□□□ -1.87
HPS3-203ENST00000460822 LMNAP02545 664 aaKnown RBP3.34□□□□□ -1.87
HPS3-203ENST00000460822 HNRNPA1P09651 372 aaKnown RBP eCLIP3.34□□□□□ -1.87
HPS3-203ENST00000460822 PTMSP20962 102 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 RRM1P23921 792 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 PRKAG1P54619 331 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 DCAF7P61962 342 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 VAMP2P63027 116 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 SATB1Q01826 763 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 PIGFQ07326 219 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 RPS6KA2Q15349 733 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 TTC22Q5TAA0 569 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 ITPRIPL1Q6GPH6 555 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 ABLIM2Q6H8Q1 611 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 TAF2Q6P1X5 1199 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 LAYNQ6UX15 382 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 Q6ZRM9 215 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 FASTKD5Q7L8L6 764 aaKnown RBP3.34□□□□□ -1.87
HPS3-203ENST00000460822 ELOA2Q8IYF1 753 aaPredicted RBP3.34□□□□□ -1.87
HPS3-203ENST00000460822 SYNE4Q8N205 404 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 ST8SIA2Q92186 375 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 CENPIQ92674 756 aaPredicted RBP3.34□□□□□ -1.87
HPS3-203ENST00000460822 PPP2R3CQ969Q6 453 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 ZUFSPQ96AP4 578 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 TWNKQ96RR1 684 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 CPPED1Q9BRF8 314 aaPredicted RBP3.34□□□□□ -1.87
HPS3-203ENST00000460822 PAIP1Q9H074 479 aaKnown RBP3.34□□□□□ -1.87
HPS3-203ENST00000460822 VPS16Q9H269 839 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 PLEKHA5Q9HAU0 1116 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 FSCN3Q9NQT6 498 aa3.34□□□□□ -1.87
HPS3-203ENST00000460822 PNMA6EA0A0J9YXQ4 647 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 CCDC196A0A1B0GTZ2 297 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 OR2W5A6NFC9 320 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 DRGXA6NNA5 263 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 YY1P25490 414 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 NTSR1P30989 418 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 PTGS2P35354 604 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 CHN2P52757 468 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 LOXL3P58215 753 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 MYO1EQ12965 1108 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 ATP1A4Q13733 1029 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 SPATA1Q5VX52 437 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 GPRIN1Q7Z2K8 1008 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 FAM83AQ86UY5 434 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 TSPYL6Q8N831 410 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 ANKRD52Q8NB46 1076 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 DNAJB14Q8TBM8 379 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 NUP133Q8WUM0 1156 aa3.34□□□□□ -1.88
HPS3-203ENST00000460822 ST8SIA4Q92187 359 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms