RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 GGCXP38435 758 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 BRCC3P46736 316 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 PLTPP55058 493 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 HTRA3P83110 453 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 CBX1P83916 185 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 ADIGQ0VDE8 80 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 EIF4EBP2Q13542 120 aaPredicted RBP8.41□□□□□ -1.06
SFPQ-202ENST00000460428 MTFR1Q15390 333 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 PPP1R7Q15435 360 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 UAP1Q16222 522 aaPredicted RBP8.41□□□□□ -1.06
SFPQ-202ENST00000460428 CCDC142Q17RM4 750 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 C15orf59Q2T9L4 293 aaPredicted RBP8.41□□□□□ -1.06
SFPQ-202ENST00000460428 HSP90B2PQ58FF3 399 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 ODF2Q5BJF6 829 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 KCNT1Q5JUK3 1230 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 OTUD1Q5VV17 481 aaPredicted RBP8.41□□□□□ -1.06
SFPQ-202ENST00000460428 OVOS1Q6IE37 1185 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 SLC39A5Q6ZMH5 540 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 ZNF280BQ86YH2 543 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 DEFB106AQ8N104 65 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 KCTD6Q8NC69 237 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 FBXO25Q8TCJ0 367 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 ATG4AQ8WYN0 398 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 MYLPFQ96A32 169 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 NTAN1Q96AB6 310 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 SNF8Q96H20 258 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 CFAP57Q96MR6 1250 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 CASD1Q96PB1 797 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 ZIM3Q96PE6 472 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 DEFB118Q96PH6 123 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 TMEM109Q9BVC6 243 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 OXCT2Q9BYC2 517 aaPredicted RBP8.41□□□□□ -1.06
SFPQ-202ENST00000460428 ADAM33Q9BZ11 813 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 DPH5Q9H2P9 285 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 EPB41L4BQ9H329 900 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 ZWILCHQ9H900 591 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 LRRC4Q9HBW1 653 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 PCDH18Q9HCL0 1135 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 KRT82Q9NSB4 513 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 MTMR10Q9NXD2 777 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 PSD3Q9NYI0 1048 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 CACNG4Q9UBN1 327 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 MTRF1LQ9UGC7 380 aaKnown RBP8.41□□□□□ -1.06
SFPQ-202ENST00000460428 PCSK1NQ9UHG2 260 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 STAP1Q9ULZ2 295 aa8.41□□□□□ -1.06
SFPQ-202ENST00000460428 TIMM13Q9Y5L4 95 aaPredicted RBP8.41□□□□□ -1.06
SFPQ-202ENST00000460428 NLRC5Q86WI3 1866 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 TANC1Q9C0D5 1861 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.4□□□□□ -1.06
SFPQ-202ENST00000460428 GOLGA8KD6RF30 607 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 PIK3R2O00459 728 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 TBC1D4O60343 1298 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 GRAP2O75791 330 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 AP1G2O75843 785 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 KRT14P02533 472 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 ITGB1P05556 798 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 CD48P09326 243 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 LCP1P13796 627 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 ZFXP17010 805 aaPredicted RBP8.4□□□□□ -1.06
SFPQ-202ENST00000460428 L1CAMP32004 1257 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 HCAR3P49019 387 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 NR2C2P49116 596 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 TKTL1P51854 596 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 ZNF135P52742 658 aaPredicted RBP8.4□□□□□ -1.06
SFPQ-202ENST00000460428 CDH6P55285 790 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 EIF3BP55884 814 aaKnown RBP8.4□□□□□ -1.06
SFPQ-202ENST00000460428 MAP3K7CLP57077 242 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 OTUD4Q01804 1114 aaKnown RBP8.4□□□□□ -1.06
SFPQ-202ENST00000460428 YWHAHQ04917 246 aaPredicted RBP8.4□□□□□ -1.06
SFPQ-202ENST00000460428 DHX9Q08211 1270 aaKnown RBP8.4□□□□□ -1.06
SFPQ-202ENST00000460428 FAAP100Q0VG06 881 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 SCAPQ12770 1279 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 CALCOCO2Q13137 446 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 XRCC4Q13426 336 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 SNX1Q13596 522 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 NOMO1Q15155 1222 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 SMTNL2Q2TAL5 461 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 ANKRD20A8PQ5CZ79 823 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 HIBCHQ6NVY1 386 aaPredicted RBP8.4□□□□□ -1.06
SFPQ-202ENST00000460428 C4orf50Q6ZRC1 276 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 CEP128Q6ZU80 1094 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 TRMT10CQ7L0Y3 403 aaKnown RBP8.4□□□□□ -1.06
SFPQ-202ENST00000460428 BHLHA9Q7RTU4 235 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 CROCCP2Q86T23 111 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 LRRTM3Q86VH5 581 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 SIX6OS1Q8N1H7 587 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 PQLC3Q8N755 202 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 ANKLE1Q8NAG6 615 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 RNF169Q8NCN4 708 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 OR10T2Q8NGX3 314 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 ACTL9Q8TC94 416 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 CLEC4CQ8WTT0 213 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 RTP4Q96DX8 246 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 FUBP3Q96I24 572 aaKnown RBP eCLIP8.4□□□□□ -1.06
SFPQ-202ENST00000460428 GDAP1L1Q96MZ0 367 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 BEGAINQ9BUH8 593 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 SNRNP25Q9BV90 132 aaKnown RBP8.4□□□□□ -1.06
SFPQ-202ENST00000460428 TRIM62Q9BVG3 475 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 MRPL9Q9BYD2 267 aaKnown RBP8.4□□□□□ -1.06
SFPQ-202ENST00000460428 ZCWPW1Q9H0M4 648 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms