RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 C11orf70Q9BRQ4 267 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 TAF4O00268 1085 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 TPD52L2O43399 206 aaKnown RBP10.1□□□□□ -0.79
UFD1-205ENST00000459854 RAB25P57735 213 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 CHI3L2Q15782 390 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 ANKRD40Q6AI12 368 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 ZBTB49Q6ZSB9 765 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 RASGRP4Q8TDF6 673 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 BRI3BPQ8WY22 251 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 MSTO1Q9BUK6 570 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 NGRNQ9NPE2 291 aaKnown RBP10.1□□□□□ -0.79
UFD1-205ENST00000459854 APEX2Q9UBZ4 518 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 XPAP23025 273 aaPredicted RBP10.09□□□□□ -0.79
UFD1-205ENST00000459854 GNA15P30679 374 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 GUCY1A2P33402 732 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 TALDO1P37837 337 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 NUDT2P50583 147 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 C1QTNF8P60827 252 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 TFAMQ00059 246 aaKnown RBP10.09□□□□□ -0.79
UFD1-205ENST00000459854 CHRNB3Q05901 458 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 KCNMA1Q12791 1236 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 LBRQ14739 615 aaKnown RBP10.09□□□□□ -0.79
UFD1-205ENST00000459854 RASA2Q15283 850 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 TIMM50Q3ZCQ8 353 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 PPP6R3Q5H9R7 873 aaPredicted RBP10.09□□□□□ -0.79
UFD1-205ENST00000459854 NET1Q7Z628 596 aaPredicted RBP10.09□□□□□ -0.79
UFD1-205ENST00000459854 NAT9Q9BTE0 207 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 XPO7Q9UIA9 1087 aaKnown RBP10.09□□□□□ -0.79
UFD1-205ENST00000459854 AP3M1Q9Y2T2 418 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 TK2O00142 265 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 MTSS1O43312 755 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 CYP2B6P20813 491 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 ATP1A4Q13733 1029 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 ANGPT1Q15389 498 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 ASAP3Q8TDY4 903 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 GDPD5Q8WTR4 605 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 BORCS5Q969J3 196 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 VPS33AQ96AX1 596 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 OTULINQ96BN8 352 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 COL4A5P29400 1685 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 RNF103O00237 685 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 RFC5P40937 340 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 PTK2BQ14289 1009 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 TTLL4Q14679 1199 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 RNF43Q68DV7 783 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 USP17L6PQ6QN14 398 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 CCDC149Q6ZUS6 474 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 ARID3BQ8IVW6 561 aaPredicted RBP10.09□□□□□ -0.79
UFD1-205ENST00000459854 EXT2Q93063 718 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 MAF1Q9H063 256 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 NOD1Q9Y239 953 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 TPRKBQ9Y3C4 175 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 HBS1LQ9Y450 684 aaKnown RBP10.09□□□□□ -0.79
UFD1-205ENST00000459854 CCDC166P0CW27 439 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 JAK1P23458 1154 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 STIP1P31948 543 aaKnown RBP10.09□□□□□ -0.79
UFD1-205ENST00000459854 TUBA3CQ13748 450 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 C3orf62Q6ZUJ4 267 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 MREGQ8N565 214 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 METTL13Q8N6R0 699 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 ENGASEQ8NFI3 743 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 MDM1Q8TC05 714 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 TMEM79Q9BSE2 394 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 C9orf16Q9BUW7 83 aa10.09□□□□□ -0.79
UFD1-205ENST00000459854 H2AFY2Q9P0M6 372 aaPredicted RBP10.09□□□□□ -0.79
UFD1-205ENST00000459854 AKAP11Q9UKA4 1901 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 MATN2O00339 956 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 PSMG1O95456 288 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 SNHG28P0DPA3 235 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 HADHAP40939 763 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 TRIM25Q14258 630 aaKnown RBP10.08□□□□□ -0.8
UFD1-205ENST00000459854 SHROOM1Q2M3G4 852 aaPredicted RBP10.08□□□□□ -0.8
UFD1-205ENST00000459854 SLC45A4Q5BKX6 768 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 EFHC2Q5JST6 749 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 SPANXN2Q5MJ10 180 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 CST9Q5W186 159 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 EFHBQ8N7U6 833 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.08□□□□□ -0.8
UFD1-205ENST00000459854 SH3TC2Q8TF17 1288 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 IFT43Q96FT9 208 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 MRPL48Q96GC5 212 aaKnown RBP10.08□□□□□ -0.8
UFD1-205ENST00000459854 FUCA2Q9BTY2 467 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 PRRG3Q9BZD7 231 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 C8orf4Q9NR00 106 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 IARS2Q9NSE4 1012 aaKnown RBP10.08□□□□□ -0.8
UFD1-205ENST00000459854 ACTL7BQ9Y614 415 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 POLBP06746 335 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 UCHL3P15374 230 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 ZNF18P17022 549 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 ATXN3P54252 364 aaPredicted RBP10.08□□□□□ -0.8
UFD1-205ENST00000459854 RRP1BQ14684 758 aaKnown RBP10.08□□□□□ -0.8
UFD1-205ENST00000459854 NCF4Q15080 339 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 RBBP7Q16576 425 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 MDH1BQ5I0G3 518 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 AAGABQ6PD74 315 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 IYDQ6PHW0 289 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 SLC13A5Q86YT5 568 aaPredicted RBP10.08□□□□□ -0.8
UFD1-205ENST00000459854 ARHGEF19Q8IW93 802 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 TRIM9Q9C026 710 aa10.08□□□□□ -0.8
UFD1-205ENST00000459854 WDR12Q9GZL7 423 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms