RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	CYLD	Q9NQC7	956 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	SLC2A4RG	Q9NR83	387 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	TDP1	Q9NUW8	608 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	OBP2A	Q9NY56	170 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	IFNK	Q9P0W0	207 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	ARHGAP26	Q9UNA1	814 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	NUP210	Q8TEM1	1887 aa	Predicted RBP	10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	MYO10	Q9HD67	2058 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	KIF26A	Q9ULI4	1882 aa	Predicted RBP	10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	OTOL1	A6NHN0	477 aa	Predicted RBP	10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	GOLGA6L19	H0YKK7	550 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	PAPSS1	O43252	624 aa	Predicted RBP	10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	GREM1	O60565	184 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	TLR5	O60602	858 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	ZBED1	O96006	694 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	FYN	P06241	537 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	CKM	P06732	381 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	MME	P08473	750 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	LCP1	P13796	627 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	PSMC3	P17980	439 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	GDI1	P31150	447 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	AVPR1A	P37288	418 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	PPP3CC	P48454	512 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	DAOA	P59103	153 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	FMO1	Q01740	532 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	PTK2	Q05397	1052 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	TNK2	Q07912	1038 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	PDCL	Q13371	301 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	ZNF268	Q14587	947 aa	Predicted RBP	10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	TRIM67	Q6ZTA4	783 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	UBALD2	Q8IYN6	164 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	SCML4	Q8N228	414 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	CELF5	Q8N6W0	485 aa	Known RBP	10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	C1orf131	Q8NDD1	294 aa	Known RBP	10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	SH3RF2	Q8TEC5	729 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	CHFR	Q96EP1	664 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	CPXM1	Q96SM3	734 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	PCDHB18P	Q96TA0	734 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	SYT11	Q9BT88	431 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	XPO4	Q9C0E2	1151 aa	Known RBP	10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	GKN1	Q9NS71	199 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	SMPD4	Q9NXE4	827 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	EHD2	Q9NZN4	543 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783	CPQ	Q9Y646	472 aa		10.79	□□□□□ -0.68
MRPL55-223	ENST00000459783		E5RJQ4	531 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	LEFTY2	O00292	366 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	MED7	O43513	233 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	ERBB2	P04626	1255 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	RARG	P13631	454 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	ALAD	P13716	330 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	ARSA	P15289	507 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	TCF3	P15923	654 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	CDH5	P33151	784 aa	Predicted RBP	10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	TUB	P50607	506 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	UBASH3A	P57075	661 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	YWHAG	P61981	247 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	SIGLEC14	Q08ET2	396 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	TAF5	Q15542	800 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	PTPN20	Q4JDL3	420 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	FILIP1L	Q4L180	1135 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	HECTD3	Q5T447	861 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	TRIM68	Q6AZZ1	485 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	IRF2BP2	Q7Z5L9	587 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	TMEM110	Q86TL2	294 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	SCUBE3	Q8IX30	993 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	BPIFB1	Q8TDL5	484 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	STK32A	Q8WU08	396 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	DEPDC1B	Q8WUY9	529 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	HSFY1	Q96LI6	401 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	FAM83C	Q9BQN1	747 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	TRMT61B	Q9BVS5	477 aa	Known RBP	10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	KLF16	Q9BXK1	252 aa	Predicted RBP	10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	MIS12	Q9H081	205 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	LHX5	Q9H2C1	402 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	LRRC4	Q9HBW1	653 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	HPS4	Q9NQG7	708 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	TLR8	Q9NR97	1041 aa	Known RBP	10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	CLIC5	Q9NZA1	410 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	ZMYM5	Q9UJ78	669 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	NAGPA	Q9UK23	515 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	DAAM1	Q9Y4D1	1078 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	MYO16	Q9Y6X6	1858 aa		10.78	□□□□□ -0.68
MRPL55-223	ENST00000459783	TMEM221	A6NGB7	291 aa		10.77	□□□□□ -0.69
MRPL55-223	ENST00000459783	LRRC53	A6NM62	1247 aa		10.77	□□□□□ -0.69
MRPL55-223	ENST00000459783		M0R296	226 aa		10.77	□□□□□ -0.69
MRPL55-223	ENST00000459783	MBL2	P11226	248 aa	Predicted RBP	10.77	□□□□□ -0.69
MRPL55-223	ENST00000459783	PFKL	P17858	780 aa		10.77	□□□□□ -0.69
MRPL55-223	ENST00000459783	STAT1	P42224	750 aa		10.77	□□□□□ -0.69
MRPL55-223	ENST00000459783	SOX9	P48436	509 aa		10.77	□□□□□ -0.69
MRPL55-223	ENST00000459783	SLC8A3	P57103	927 aa		10.77	□□□□□ -0.69
MRPL55-223	ENST00000459783	NOMO3	P69849	1222 aa		10.77	□□□□□ -0.69
MRPL55-223	ENST00000459783	PITX1	P78337	314 aa	Predicted RBP	10.77	□□□□□ -0.69
MRPL55-223	ENST00000459783	MTF1	Q14872	753 aa		10.77	□□□□□ -0.69
MRPL55-223	ENST00000459783	C2CD6	Q53TS8	623 aa		10.77	□□□□□ -0.69
MRPL55-223	ENST00000459783	BSPRY	Q5W0U4	402 aa		10.77	□□□□□ -0.69
MRPL55-223	ENST00000459783	NAIF1	Q69YI7	327 aa	Predicted RBP	10.77	□□□□□ -0.69
MRPL55-223	ENST00000459783	CWF19L1	Q69YN2	538 aa	Known RBP	10.77	□□□□□ -0.69
MRPL55-223	ENST00000459783	SIX6OS1	Q8N1H7	587 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms