RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 LGALS2P05162 132 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 KRT16P08779 473 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 FAM163BP0C2L3 166 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 DHRS4L1P0CG22 281 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 ETS1P14921 441 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 CALB2P22676 271 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 PRKCHP24723 683 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 AXLP30530 894 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 SSTR1P30872 391 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 FDFT1P37268 417 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 CCNFP41002 786 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 ELK3P41970 407 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 CLCN3P51790 818 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 NEK3P51956 506 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 NDST1P52848 882 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 BCAT1P54687 386 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 YWHAGP61981 247 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDAC3-202ENST00000459727 KCNJ2P63252 427 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 SLC6A3Q01959 620 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 PPARDQ03181 441 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 FSTL1Q12841 308 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 AMHR2Q16671 573 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 GOLGA7BQ2TAP0 167 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 FNBP1LQ5T0N5 605 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 ANKRD20A3Q5VUR7 823 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 OR6B2Q6IFH4 312 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 OTOAQ7RTW8 1153 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 TMEM110Q86TL2 294 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 FAM228AQ86W67 206 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 ANKMY2Q8IV38 441 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 UNC45BQ8IWX7 931 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 ARFGAP1Q8N6T3 406 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 TEX9Q8N6V9 391 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 MZB1Q8WU39 189 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 RXFP2Q8WXD0 754 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 CDKL2Q92772 493 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 ATP2A3Q93084 1043 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 L3MBTL3Q96JM7 780 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-202ENST00000459727 EIF2B3Q9NR50 452 aaKnown RBP9.2□□□□□ -0.94
HDAC3-202ENST00000459727 RAB6BQ9NRW1 208 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 PPP1R1BQ9UD71 204 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-202ENST00000459727 ZC3H7BQ9UGR2 993 aaKnown RBP9.2□□□□□ -0.94
HDAC3-202ENST00000459727 PCSK1NQ9UHG2 260 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 GTF2IRD1Q9UHL9 959 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 TSPAN16Q9UKR8 245 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 SORCS3Q9UPU3 1222 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 AKT3Q9Y243 479 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 CHKBQ9Y259 395 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 RAD54BQ9Y620 910 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 PTPRFP10586 1907 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 KBTBD13C9JR72 458 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 GOLGA8MH3BSY2 632 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 KCNN4O15554 427 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 B4GALT5O43286 388 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 STRNO43815 780 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 GCATO75600 419 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 ZBTB7AO95365 584 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 INSRRP14616 1297 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 RAP1GAPP47736 663 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 ZNF135P52742 658 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-202ENST00000459727 ARFIP2P53365 341 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 AIF1P55008 147 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 GDF10P55107 478 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 OSTNP61366 133 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 ZBTB16Q05516 673 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 ARHGAP1Q07960 439 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 BST2Q10589 180 aaKnown RBP9.19□□□□□ -0.94
HDAC3-202ENST00000459727 SLC1A5Q15758 541 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 DPYSL2Q16555 572 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 KCTD19Q17RG1 926 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-202ENST00000459727 TSNAXIP1Q2TAA8 658 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 SLC10A6Q3KNW5 377 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 KCNT1Q5JUK3 1230 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 ANKRD22Q5VYY1 191 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 OLFML1Q6UWY5 402 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 KYAT3Q6YP21 454 aaKnown RBP9.19□□□□□ -0.94
HDAC3-202ENST00000459727 FAM183BPQ6ZVS7 135 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 EEPD1Q7L9B9 569 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 SLC26A9Q7LBE3 791 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 STRADAQ7RTN6 431 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 TRIM50Q86XT4 487 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 FBXO16Q8IX29 292 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-202ENST00000459727 EMC1Q8N766 993 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 PLD5Q8N7P1 536 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 MAB21L3Q8N8X9 362 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 GSDMBQ8TAX9 411 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 CXorf38Q8TB03 319 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 TCP10LQ8TDR4 215 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 ZC3H15Q8WU90 426 aaKnown RBP9.19□□□□□ -0.94
HDAC3-202ENST00000459727 NLRP7Q8WX94 980 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 ACSF2Q96CM8 615 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-202ENST00000459727 KIF12Q96FN5 646 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 OTUD5Q96G74 571 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 HSFY1Q96LI6 401 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 FGD4Q96M96 766 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 C7orf26Q96N11 449 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 WWP1Q9H0M0 922 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 RNPEPL1Q9HAU8 725 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 PCDH18Q9HCL0 1135 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms