RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 APOC4-APOC2K7ER74 178 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 WDR46O15213 610 aaKnown RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 CST8O60676 142 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 PIAS1O75925 651 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 ASS1P00966 412 aaKnown RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 APOC2P02655 101 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 HARSP12081 509 aaKnown RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 MYCLP12524 364 aaPredicted RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 CCNFP41002 786 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 ELK3P41970 407 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 FAAP100Q0VG06 881 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 DPYSL3Q14195 570 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 KCNJ11Q14654 390 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 BBS9Q3SYG4 887 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 KBTBD12Q3ZCT8 623 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 TTC39BQ5VTQ0 682 aaPredicted RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 ARMC3Q5W041 872 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 KYAT3Q6YP21 454 aaKnown RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 CCDC80Q76M96 950 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 ADGRG6Q86SQ4 1221 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 TREML1Q86YW5 311 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 IGDCC3Q8IVU1 814 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 UNC45BQ8IWX7 931 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 SCUBE1Q8IWY4 988 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 NLGN1Q8N2Q7 840 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 ARFGAP1Q8N6T3 406 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 SMC1BQ8NDV3 1235 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 OR5B17Q8NGF7 314 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 RAB3IL1Q8TBN0 382 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 NCSTNQ92542 709 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 TTC17Q96AE7 1141 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 ACSF2Q96CM8 615 aaPredicted RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 GPRASP2Q96D09 838 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 ASCC2Q9H1I8 757 aaPredicted RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 CYP26B1Q9NR63 512 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 GINM1Q9NU53 330 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 SIRPGQ9P1W8 387 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 SAE1Q9UBE0 346 aaPredicted RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 ZNF180Q9UJW8 692 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 TBC1D30Q9Y2I9 924 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 IKBKGQ9Y6K9 419 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 DOCK1Q14185 1865 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 A0A0B4J269 797 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 KBTBD13C9JR72 458 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 LRCH4O75427 683 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 LYNP07948 512 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 INHBAP08476 426 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 PIM1P11309 404 aaPredicted RBP8.84□□□□□ -0.99
VPS50-208ENST00000458707 ANPEPP15144 967 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 KCNA2P16389 499 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 IL1R2P27930 398 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 AP3M2P53677 418 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 DSG1Q02413 1049 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 MAP3K10Q02779 954 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 NCOA4Q13772 614 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 HNRNPDQ14103 355 aaKnown RBP8.84□□□□□ -0.99
VPS50-208ENST00000458707 DNAL1Q4LDG9 190 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 TEX44Q53QW1 395 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 TMCO4Q5TGY1 634 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 ANGEL2Q5VTE6 544 aaKnown RBP8.84□□□□□ -0.99
VPS50-208ENST00000458707 FKBP1CQ5VVH2 108 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 ATG16L1Q676U5 607 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 C16orf87Q6PH81 154 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 ALYREFQ86V81 257 aaKnown RBP8.84□□□□□ -0.99
VPS50-208ENST00000458707 VSIG10LQ86VR7 867 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 SLC26A11Q86WA9 606 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 ARHGAP18Q8N392 663 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 RBM15BQ8NDT2 890 aaKnown RBP8.84□□□□□ -0.99
VPS50-208ENST00000458707 FAM161BQ96MY7 647 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 PANX3Q96QZ0 392 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 SRPK1Q96SB4 655 aaKnown RBP8.84□□□□□ -0.99
VPS50-208ENST00000458707 RMDN3Q96TC7 470 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 ECSITQ9BQ95 431 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 CCDC106Q9BWC9 280 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 TRIM4Q9C037 500 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 WWP1Q9H0M0 922 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 ARMCX1Q9P291 453 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 ZNF70Q9UC06 446 aaPredicted RBP8.84□□□□□ -0.99
VPS50-208ENST00000458707 TAGLN3Q9UI15 199 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 AGTPBP1Q9UPW5 1226 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 CHMP2BQ9UQN3 213 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 WDR37Q9Y2I8 494 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 PLLPQ9Y342 182 aa8.84□□□□□ -0.99
VPS50-208ENST00000458707 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.84□□□□□ -0.99
VPS50-208ENST00000458707 C2orf71A6NGG8 1288 aa8.83□□□□□ -1
VPS50-208ENST00000458707 H3BRJ5 948 aa8.83□□□□□ -1
VPS50-208ENST00000458707 I3L4J1 428 aa8.83□□□□□ -1
VPS50-208ENST00000458707 COPEO14579 308 aa8.83□□□□□ -1
VPS50-208ENST00000458707 CHADO15335 359 aa8.83□□□□□ -1
VPS50-208ENST00000458707 SNNO75324 88 aaPredicted RBP8.83□□□□□ -1
VPS50-208ENST00000458707 FKBP6O75344 327 aa8.83□□□□□ -1
VPS50-208ENST00000458707 CSDE1O75534 798 aaKnown RBP8.83□□□□□ -1
VPS50-208ENST00000458707 ATG7O95352 703 aa8.83□□□□□ -1
VPS50-208ENST00000458707 PSAPP07602 524 aa8.83□□□□□ -1
VPS50-208ENST00000458707 ASNSP08243 561 aa8.83□□□□□ -1
VPS50-208ENST00000458707 PSMA2P25787 234 aa8.83□□□□□ -1
VPS50-208ENST00000458707 STIP1P31948 543 aaKnown RBP8.83□□□□□ -1
VPS50-208ENST00000458707 RFC1P35251 1148 aaPredicted RBP8.83□□□□□ -1
VPS50-208ENST00000458707 PSMC4P43686 418 aa8.83□□□□□ -1
VPS50-208ENST00000458707 AP2B1P63010 937 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms