RNA–Protein interactions for RNA: ENST00000458625.5

CCL25-204, Transcript of C-C motif chemokine ligand 25, humanhuman

TSL 5

Gene CCL25, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL25-204ENST00000458625 SEMA4CQ9C0C4 833 aa12.72□□□□□ -0.37
CCL25-204ENST00000458625 FOXP1Q9H334 677 aaPredicted RBP12.72□□□□□ -0.37
CCL25-204ENST00000458625 GMIPQ9P107 970 aa12.72□□□□□ -0.37
CCL25-204ENST00000458625 USP36Q9P275 1121 aaKnown RBP12.72□□□□□ -0.37
CCL25-204ENST00000458625 LARSQ9P2J5 1176 aaKnown RBP12.72□□□□□ -0.37
CCL25-204ENST00000458625 DNMT3LQ9UJW3 386 aa12.72□□□□□ -0.37
CCL25-204ENST00000458625 TEX15Q9BXT5 2789 aa12.72□□□□□ -0.37
CCL25-204ENST00000458625 E2F8A0AVK6 867 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 TNFSF14O43557 240 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 HUS1O60921 280 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 ABL1P00519 1130 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 MBL2P11226 248 aaPredicted RBP12.71□□□□□ -0.37
CCL25-204ENST00000458625 PLCG1P19174 1290 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 ADSSP30520 456 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 CSNK1EP49674 416 aaKnown RBP12.71□□□□□ -0.37
CCL25-204ENST00000458625 ZNF131P52739 623 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 TAF10Q12962 218 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 DCAF12L1Q5VU92 463 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 ADALQ6DHV7 355 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 LIMS2Q7Z4I7 341 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 ADGRF2Q8IZF7 708 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 TMEM86AQ8N2M4 240 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 KBTBD7Q8WVZ9 684 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 P2RY11Q96G91 374 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 CLMPQ9H6B4 373 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 SPHK2Q9NRA0 654 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 GDAP2Q9NXN4 497 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 TBC1D14Q9P2M4 693 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 SIX4Q9UIU6 781 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 AGO2Q9UKV8 859 aaKnown RBP12.71□□□□□ -0.37
CCL25-204ENST00000458625 NFE2L3Q9Y4A8 694 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 NME7Q9Y5B8 376 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 SNX9Q9Y5X1 595 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 STYXL1Q9Y6J8 313 aa12.71□□□□□ -0.37
CCL25-204ENST00000458625 UBR5O95071 2799 aaPredicted RBP12.71□□□□□ -0.38
CCL25-204ENST00000458625 NUMA1Q14980 2115 aa12.71□□□□□ -0.38
CCL25-204ENST00000458625 E9PAM4 449 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 F8VP50 259 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 KCNK3O14649 394 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 COCHO43405 550 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 GRIK1P39086 918 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 PNPLA4P41247 253 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 TRAPPC10P48553 1259 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 NOP14P78316 857 aaKnown RBP12.7□□□□□ -0.38
CCL25-204ENST00000458625 TFAMQ00059 246 aaKnown RBP12.7□□□□□ -0.38
CCL25-204ENST00000458625 GTF2BQ00403 316 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 KIF19Q2TAC6 998 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 ANO4Q32M45 955 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 FUT11Q495W5 492 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 TMEM119Q4V9L6 283 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 KCNT1Q5JUK3 1230 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 BTBD8Q5XKL5 378 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 VSTM1Q6UX27 236 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 GPR155Q7Z3F1 870 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 SYT15Q9BQS2 421 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 MKRN2Q9H000 416 aaKnown RBP12.7□□□□□ -0.38
CCL25-204ENST00000458625 KCND2Q9NZV8 630 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 MAGEC2Q9UBF1 373 aaPredicted RBP12.7□□□□□ -0.38
CCL25-204ENST00000458625 EIF2B4Q9UI10 523 aaKnown RBP12.7□□□□□ -0.38
CCL25-204ENST00000458625 SNX11Q9Y5W9 270 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 MYLKQ15746 1914 aa12.7□□□□□ -0.38
CCL25-204ENST00000458625 TEX51A0A1B0GUA7 166 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 METTL12A8MUP2 240 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 CBX4O00257 560 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 CAPN9O14815 690 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 GREM1O60565 184 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 PCSK1P29120 753 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 LHX1P48742 406 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 TLE3Q04726 772 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 GRAMD4Q6IC98 578 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 IL27RAQ6UWB1 636 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 LAYNQ6UX15 382 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 LRRC69Q6ZNQ3 347 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 METTL3Q86U44 580 aaKnown RBP12.69□□□□□ -0.38
CCL25-204ENST00000458625 DDX42Q86XP3 938 aaKnown RBP eCLIP12.69□□□□□ -0.38
CCL25-204ENST00000458625 MYCT1Q8N699 235 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 TOP6BLQ8N6T0 577 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 CADM4Q8NFZ8 388 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 OTUB2Q96DC9 234 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 NXPE2Q96DL1 559 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 PCED1BQ96HM7 432 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 KIF2CQ99661 725 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 HNRNPABQ99729 332 aaKnown RBP12.69□□□□□ -0.38
CCL25-204ENST00000458625 RAB34Q9BZG1 259 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 ITM2CQ9NQX7 267 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 DNAJC17Q9NVM6 304 aaKnown RBP12.69□□□□□ -0.38
CCL25-204ENST00000458625 ODF2LQ9ULJ1 636 aa12.69□□□□□ -0.38
CCL25-204ENST00000458625 ZBTB24O43167 697 aaPredicted RBP12.68□□□□□ -0.38
CCL25-204ENST00000458625 TRAK2O60296 914 aa12.68□□□□□ -0.38
CCL25-204ENST00000458625 CACNG3O60359 315 aa12.68□□□□□ -0.38
CCL25-204ENST00000458625 PPP3CCP48454 512 aa12.68□□□□□ -0.38
CCL25-204ENST00000458625 TPMTP51580 245 aa12.68□□□□□ -0.38
CCL25-204ENST00000458625 POU5F1Q01860 360 aaKnown RBP12.68□□□□□ -0.38
CCL25-204ENST00000458625 CYP27A1Q02318 531 aa12.68□□□□□ -0.38
CCL25-204ENST00000458625 C4orf50Q6ZRC1 276 aa12.68□□□□□ -0.38
CCL25-204ENST00000458625 GPBP1Q86WP2 473 aa12.68□□□□□ -0.38
CCL25-204ENST00000458625 TMPRSS12Q86WS5 348 aa12.68□□□□□ -0.38
CCL25-204ENST00000458625 FMNL3Q8IVF7 1028 aa12.68□□□□□ -0.38
CCL25-204ENST00000458625 CSGALNACT2Q8N6G5 542 aa12.68□□□□□ -0.38
CCL25-204ENST00000458625 LRRC52Q8N7C0 313 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms