RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 ZNF513Q8N8E2 541 aaPredicted RBP11.07□□□□□ -0.64
HDLBP-227ENST00000458564 XXYLT1Q8NBI6 393 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 CEP76Q8TAP6 659 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 FBXO32Q969P5 355 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 SYAP1Q96A49 352 aaPredicted RBP11.07□□□□□ -0.64
HDLBP-227ENST00000458564 ZSCAN16Q9H4T2 348 aaPredicted RBP11.07□□□□□ -0.64
HDLBP-227ENST00000458564 CAPN10Q9HC96 672 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 CD248Q9HCU0 757 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 DMAP1Q9NPF5 467 aaPredicted RBP11.07□□□□□ -0.64
HDLBP-227ENST00000458564 SPHK2Q9NRA0 654 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 COMMD8Q9NX08 183 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 CGNQ9P2M7 1197 aaKnown RBP11.07□□□□□ -0.64
HDLBP-227ENST00000458564 DEC1Q9P2X7 70 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 RALYQ9UKM9 306 aaKnown RBP11.07□□□□□ -0.64
HDLBP-227ENST00000458564 STARD13Q9Y3M8 1113 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 BAHCC1Q9P281 2608 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 ATP8B3O60423 1300 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 DSPP15924 2871 aaKnown RBP11.06□□□□□ -0.64
HDLBP-227ENST00000458564 PI4KAP42356 2102 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 MYO18AQ92614 2054 aaKnown RBP11.06□□□□□ -0.64
HDLBP-227ENST00000458564 TBC1D3BA6NDS4 549 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 SERPINF2P08697 491 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 GABRG2P18507 467 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 ITPKAP23677 461 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 MAPK8P45983 427 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 CYP2J2P51589 502 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 MYL6P60660 151 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 ASIC1P78348 528 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 CLDN10P78369 228 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 AMPD3Q01432 767 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 TRPC3Q13507 836 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 DUOXA1Q1HG43 343 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 BMT2Q1RMZ1 405 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 SLC36A4Q6YBV0 504 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 NUDT18Q6ZVK8 323 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 PAQR9Q6ZVX9 377 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 ARMCX6Q7L4S7 300 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 BBS7Q8IWZ6 715 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 RDH13Q8NBN7 331 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 LINC00301Q8NCQ3 95 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 SCAMP5Q8TAC9 235 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 SCFD1Q8WVM8 642 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 ZNF516Q92618 1163 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 CCDC127Q96BQ5 260 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 SMARCD1Q96GM5 515 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 INTS4Q96HW7 963 aaKnown RBP11.06□□□□□ -0.64
HDLBP-227ENST00000458564 TNIP3Q96KP6 325 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 KCNK16Q96T55 309 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 CCSER2Q9H7U1 834 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 MAGEF1Q9HAY2 307 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 ZDHHC4Q9NPG8 344 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 CALCOCO1Q9P1Z2 691 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 NXF1Q9UBU9 619 aaKnown RBP11.06□□□□□ -0.64
HDLBP-227ENST00000458564 HCN2Q9UL51 889 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 CIZ1Q9ULV3 898 aaPredicted RBP11.06□□□□□ -0.64
HDLBP-227ENST00000458564 SLC6A14Q9UN76 642 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 MTMR6Q9Y217 621 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 SH3BP1Q9Y3L3 701 aa11.06□□□□□ -0.64
HDLBP-227ENST00000458564 ATXN2Q99700 1313 aaKnown RBP11.06□□□□□ -0.64
HDLBP-227ENST00000458564 MYOFQ9NZM1 2061 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 PCDH15Q96QU1 1955 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 A0A1W2PQF6 199 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 FAM221BA6H8Z2 402 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 H0Y626 953 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 CACNG3O60359 315 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 GREM1O60565 184 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 PPP6R2O75170 966 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 ZNF217O75362 1048 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 TRIM16O95361 564 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 HOXB2P14652 356 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 NTSR1P30989 418 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 AP3M2P53677 418 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 RPL6Q02878 288 aaKnown RBP11.05□□□□□ -0.64
HDLBP-227ENST00000458564 IFRD2Q12894 506 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-227ENST00000458564 C10orf76Q5T2E6 689 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 UNC13DQ70J99 1090 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 TMEM25Q86YD3 366 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 FUKQ8N0W3 1084 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 PGBD3Q8N328 593 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 TMEM174Q8WUU8 243 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 ZCCHC14Q8WYQ9 949 aaKnown RBP11.05□□□□□ -0.64
HDLBP-227ENST00000458564 C7orf25Q9BPX7 421 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 SMYD3Q9H7B4 428 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 CSNK1G1Q9HCP0 422 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 MARK1Q9P0L2 795 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 GMIPQ9P107 970 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 MSRB2Q9Y3D2 182 aa11.05□□□□□ -0.64
HDLBP-227ENST00000458564 ANKRD11Q6UB99 2663 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-227ENST00000458564 IGHV1OR15-9A0A0B4J2B8 117 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 SRRM3A6NNA2 597 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-227ENST00000458564 CLIC2O15247 247 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 SPTLC2O15270 562 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 HYAL3O43820 417 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-227ENST00000458564 TLR5O60602 858 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 CFIP05156 583 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 ATXN3P54252 364 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-227ENST00000458564 SIM1P81133 766 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-227ENST00000458564 GFPT1Q06210 699 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-227ENST00000458564 ZNF33AQ06730 810 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 HNRNPDQ14103 355 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms