RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 RSPH10BP0C881 870 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 MTHFD1P11586 935 aaKnown RBP7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 COL6A2P12110 1019 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 FCER1AP12319 257 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 ATP1A3P13637 1013 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 CCNE1P24864 410 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 PKLRP30613 574 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 CYP4F2P78329 520 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 CCNA1P78396 465 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 XIAPP98170 497 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 CYP4F3Q08477 520 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 FSTL1Q12841 308 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 GRSF1Q12849 480 aaKnown RBP eCLIP7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 GIT2Q14161 759 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 CTTNQ14247 550 aaKnown RBP7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 RCN2Q14257 317 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 PTK2BQ14289 1009 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 FAM110CQ1W6H9 321 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 CENPPQ6IPU0 288 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 ALKBH2Q6NS38 261 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 C1orf186Q6ZWK4 172 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 SND1Q7KZF4 910 aaKnown RBP eCLIP7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 CROCCP2Q86T23 111 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 C4orf19Q8IY42 314 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 TRMT44Q8IYL2 757 aaKnown RBP7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 TC2NQ8N9U0 490 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 MINDY2Q8NBR6 621 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 ARRDC4Q8NCT1 418 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 GPRC5AQ8NFJ5 357 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 NELFBQ8WX92 580 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 ZIM3Q96PE6 472 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 ZNF317Q96PQ6 595 aaPredicted RBP7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 NACC1Q96RE7 527 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 PARK7Q99497 189 aaKnown RBP7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 TUBA1CQ9BQE3 449 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 MRPL9Q9BYD2 267 aaKnown RBP7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 PORCNQ9H237 461 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 LRMDAQ9H2I8 198 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 RUBCNLQ9H714 662 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 PLCB1Q9NQ66 1216 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 FARSBQ9NSD9 589 aaKnown RBP7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 SIRT5Q9NXA8 310 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 DNAJC12Q9UKB3 198 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 CTNND2Q9UQB3 1225 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 SIP14410 1827 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 IGSF9BQ9UPX0 1349 aa7.11□□□□□ -1.27
CUBNP3-201ENST00000457461 MANSC4A6NHS7 340 aaPredicted RBP7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 ZNF233A6NK53 670 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 PSMA7O14818 248 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 NDUFA2O43678 99 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 ALX3O95076 343 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 CYP1A1P04798 512 aaPredicted RBP7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 ZNF3P17036 446 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 PRKACAP17612 351 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 MZF1P28698 734 aaPredicted RBP7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 EVI2BP34910 448 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 ADCY8P40145 1251 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 QARSP47897 775 aaKnown RBP7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 RASSF2P50749 326 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 GALK1P51570 392 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 PMS1P54277 932 aaKnown RBP7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 POLR2GP62487 172 aaKnown RBP eCLIP7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 PRKCEQ02156 737 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 AP1B1Q10567 949 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 HNRNPDQ14103 355 aaKnown RBP7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 MTERF2Q49AM1 385 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 ZNF569Q5MCW4 686 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 FAM26FQ5R3K3 315 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 RINT1Q6NUQ1 792 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 ZNF449Q6P9G9 518 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 C1orf228Q6PIY5 440 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 TMEM92Q6UXU6 159 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 ZNF704Q6ZNC4 412 aaPredicted RBP7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 FRA10AC1Q70Z53 315 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 DYMQ7RTS9 669 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 FAM124AQ86V42 546 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 TPH2Q8IWU9 490 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 CYP4X1Q8N118 509 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 NATD1Q8N6N6 113 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 CHPT1Q8WUD6 406 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 BCL7CQ8WUZ0 217 aaPredicted RBP7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 RAPGEF5Q92565 580 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 HHIPL1Q96JK4 782 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 LRGUKQ96M69 825 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 MMP19Q99542 508 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 PSD2Q9BQI7 771 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 REEP2Q9BRK0 252 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 RUSC1Q9BVN2 902 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 GRIP2Q9C0E4 1043 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 SNX25Q9H3E2 840 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 TLE6Q9H808 572 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 ECT2Q9H8V3 914 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 PLEKHA5Q9HAU0 1116 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 FANCEQ9HB96 536 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 RXFP1Q9HBX9 757 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 FANCFQ9NPI8 374 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 OLFML3Q9NRN5 406 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 TXLNGQ9NUQ3 528 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 INTS13Q9NVM9 706 aa7.1□□□□□ -1.27
CUBNP3-201ENST00000457461 ZDHHC7Q9NXF8 308 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms