RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 TNFRSF4P43489 277 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 ASIC1P78348 528 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 TNK2Q07912 1038 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 ZNF211Q13398 564 aaPredicted RBP2.31□□□□□ -2.04
NEDD1-204ENST00000457368 ZNF77Q15935 545 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 PREPLQ4J6C6 727 aaPredicted RBP2.31□□□□□ -2.04
NEDD1-204ENST00000457368 GPR158Q5T848 1215 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 APBB1IPQ7Z5R6 666 aaPredicted RBP2.31□□□□□ -2.04
NEDD1-204ENST00000457368 DNAJB7Q7Z6W7 309 aaPredicted RBP2.31□□□□□ -2.04
NEDD1-204ENST00000457368 MON1AQ86VX9 555 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 ARMC10Q8N2F6 343 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 C3orf58Q8NDZ4 430 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 C2orf15Q8WU43 125 aaKnown RBP2.31□□□□□ -2.04
NEDD1-204ENST00000457368 OSCP1Q8WVF1 389 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 PIBF1Q8WXW3 757 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 EDEM1Q92611 657 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 FGF11Q92914 225 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 KCNN1Q92952 543 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 TMEM143Q96AN5 459 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 ZFYVE19Q96K21 471 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 CEP170P1Q96L14 293 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 POLR3CQ9BUI4 534 aaPredicted RBP2.31□□□□□ -2.04
NEDD1-204ENST00000457368 SLC46A2Q9BY10 475 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 KRTAP4-5Q9BYR2 181 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 CCDC113Q9H0I3 377 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 C2orf40Q9H1Z8 148 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 PDZD7Q9H5P4 517 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 ZFYVE1Q9HBF4 777 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 C6orf50Q9HD87 102 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 KCNMB3Q9NPA1 279 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 PRDM7Q9NQW5 492 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 RAD18Q9NS91 495 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 PARP2Q9UGN5 583 aa2.31□□□□□ -2.04
NEDD1-204ENST00000457368 NUP205Q92621 2012 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 TSC2P49815 1807 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 PHLPP2Q6ZVD8 1323 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 MYH9P35579 1960 aaKnown RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 IGHV1OR15-9A0A0B4J2B8 117 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 A0A1B0GTW7 788 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 TMEM150BA6NC51 233 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CCDC69A6NI79 296 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 INO80B-WBP1J3KQ70 363 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 ACKR2O00590 384 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 PRC1O43663 620 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CER1O95813 267 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 IGLV1-40P01703 118 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 IGLV3-19P01714 112 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 NFICP08651 508 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 ITPKAP23677 461 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 IGFBP6P24592 240 aaPredicted RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 MPSTP25325 297 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 MAP4P27816 1152 aaKnown RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 LRPAP1P30533 357 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 KIR2DL1P43626 348 aaPredicted RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 TUFMP49411 452 aaKnown RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CLCNKBP51801 687 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 NPEPPSP55786 919 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 FAM160A1Q05DH4 1040 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 ZNF33AQ06730 810 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 ILKQ13418 452 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CTXN3Q4LDR2 81 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 JAKMIP3Q5VZ66 844 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CASC1Q6TDU7 716 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CWC27Q6UX04 472 aaKnown RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 TRMT11Q7Z4G4 463 aaKnown RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 KRTAP19-1Q8IUB9 90 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 FMNL3Q8IVF7 1028 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 SMC5Q8IY18 1101 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 ENGASEQ8NFI3 743 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CADM4Q8NFZ8 388 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 PIP4K2CQ8TBX8 421 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 HASPINQ8TF76 798 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 USP13Q92995 863 aaPredicted RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 ATP2A3Q93084 1043 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 TMEM176AQ96HP8 235 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CPB2Q96IY4 423 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 HIC2Q96JB3 615 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CCDC136Q96JN2 1154 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CEP295NLQ96MC4 621 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CAMK1GQ96NX5 476 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 SEMA3CQ99985 751 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 SSBP4Q9BWG4 385 aaPredicted RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 ZSWIM4Q9H7M6 989 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 SH3GLB2Q9NR46 395 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 POLR3BQ9NW08 1133 aaPredicted RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CNTN3Q9P232 1028 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CACNG4Q9UBN1 327 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 RNF112Q9ULX5 631 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 SLC12A7Q9Y666 1083 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 KIAA1549LQ6ZVL6 1849 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 PTPN13Q12923 2485 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 PDCD11Q14690 1871 aaKnown RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 HECTD1Q9ULT8 2610 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 SMIM28A0A1B0GU29 152 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 MTMR11A4FU01 709 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 PODXLO00592 558 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 B4GALT5O43286 388 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 AFPP02771 609 aaKnown RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CFIP05156 583 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 PRKCBP05771 671 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms