RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 FCARP24071 287 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 DDX6P26196 483 aaKnown RBP eCLIP10.59□□□□□ -0.71
ATG4A-206ENST00000457035 STAT1P42224 750 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 ARHGAP15Q53QZ3 475 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 TANGO2Q6ICL3 276 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 DENND1BQ6P3S1 775 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 CCDC186Q7Z3E2 898 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 GPIHBP1Q8IV16 184 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 ARID3BQ8IVW6 561 aaPredicted RBP10.59□□□□□ -0.71
ATG4A-206ENST00000457035 CMTM8Q8IZV2 173 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 SLC44A3Q8N4M1 653 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 MAB21L3Q8N8X9 362 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 ZSCAN18Q8TBC5 510 aaPredicted RBP10.59□□□□□ -0.71
ATG4A-206ENST00000457035 STK32AQ8WU08 396 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 MRPS31Q92665 395 aaKnown RBP10.59□□□□□ -0.71
ATG4A-206ENST00000457035 SMARCD2Q92925 531 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 FBXO32Q969P5 355 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 HSFY1Q96LI6 401 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 SLITRK1Q96PX8 696 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 GCNAQ96QF7 691 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 SPAG5Q96R06 1193 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 SLC22A12Q96S37 553 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 SLC4A5Q9BY07 1137 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 PLA2G2FQ9BZM2 168 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 EDEM3Q9BZQ6 932 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 XPO4Q9C0E2 1151 aaKnown RBP10.59□□□□□ -0.71
ATG4A-206ENST00000457035 RNF38Q9H0F5 515 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 LHX5Q9H2C1 402 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 GMIPQ9P107 970 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 CYTH4Q9UIA0 394 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 MUC6Q6W4X9 2439 aa10.59□□□□□ -0.71
ATG4A-206ENST00000457035 ECI2O75521 394 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 OAS1P00973 400 aaKnown RBP10.58□□□□□ -0.72
ATG4A-206ENST00000457035 USP17L7P0C7H9 530 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 PFKLP17858 780 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 KRT9P35527 623 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 VIPR2P41587 438 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 RGS7P49802 495 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 TKTL1P51854 596 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 FIGNQ5HY92 759 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 HFE2Q6ZVN8 426 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 MTSS1LQ765P7 747 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 BHLHA9Q7RTU4 235 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 IRF2BP2Q7Z5L9 587 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 SCD5Q86SK9 330 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 TMEM110Q86TL2 294 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 NOP9Q86U38 636 aaKnown RBP10.58□□□□□ -0.72
ATG4A-206ENST00000457035 SCML4Q8N228 414 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 ZNF276Q8N554 614 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 ARL14EPQ8N8R7 260 aaPredicted RBP10.58□□□□□ -0.72
ATG4A-206ENST00000457035 PDZD8Q8NEN9 1154 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 EPS8L1Q8TE68 723 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 NDRG1Q92597 394 aaKnown RBP10.58□□□□□ -0.72
ATG4A-206ENST00000457035 ELSPBP1Q96BH3 223 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 RSPRY1Q96DX4 576 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 LRRC3BQ96PB8 259 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 NUP58Q9BVL2 599 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 SLITRK6Q9H5Y7 841 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 NMUR1Q9HB89 426 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 LRRC4Q9HBW1 653 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 ZFP14Q9HCL3 533 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 OSER1Q9NX31 292 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 NOCTQ9UK39 431 aaKnown RBP10.58□□□□□ -0.72
ATG4A-206ENST00000457035 MYO6Q9UM54 1294 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 NUMBLQ9Y6R0 609 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 ZDBF2Q9HCK1 2354 aa10.58□□□□□ -0.72
ATG4A-206ENST00000457035 MYO18AQ92614 2054 aaKnown RBP10.57□□□□□ -0.72
ATG4A-206ENST00000457035 KIF26AQ9ULI4 1882 aaPredicted RBP10.57□□□□□ -0.72
ATG4A-206ENST00000457035 A0A1W2PQH9 124 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 PRAMEF12O95522 483 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 OLFM2O95897 454 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 ZBED1O96006 694 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 ABL1P00519 1130 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 MMEP08473 750 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 CHRNB2P17787 502 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 HDCP19113 662 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 CDH5P33151 784 aaPredicted RBP10.57□□□□□ -0.72
ATG4A-206ENST00000457035 ZXDBP98169 803 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 TDGQ13569 410 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 SARM1Q6SZW1 724 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 CACNA2D4Q7Z3S7 1137 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 MFSD6LQ8IWD5 586 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 USP13Q92995 863 aaPredicted RBP10.57□□□□□ -0.72
ATG4A-206ENST00000457035 ZDHHC16Q969W1 377 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 E2F7Q96AV8 911 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 KXD1Q9BQD3 176 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 ANP32EQ9BTT0 268 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 ULBP1Q9BZM6 244 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 SMG9Q9H0W8 520 aaKnown RBP10.57□□□□□ -0.72
ATG4A-206ENST00000457035 CYLDQ9NQC7 956 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 CNGB3Q9NQW8 809 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 TLR8Q9NR97 1041 aaKnown RBP10.57□□□□□ -0.72
ATG4A-206ENST00000457035 TDP1Q9NUW8 608 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 OBP2AQ9NY56 170 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 AIPL1Q9NZN9 384 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 CCL26Q9Y258 94 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 ATG2BQ96BY7 2078 aa10.57□□□□□ -0.72
ATG4A-206ENST00000457035 TRAV19A0A0A6YYK7 116 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 LRRC53A6NM62 1247 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 HEPACAM2A8MVW5 462 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms