RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 KIAA1257Q9ULG3 409 aa18.71■□□□□ 0.59
COPS7A-202ENST00000455113 PCDHB4Q9Y5E5 795 aa18.71■□□□□ 0.59
COPS7A-202ENST00000455113 OAS1P00973 400 aaKnown RBP18.71■□□□□ 0.59
COPS7A-202ENST00000455113 SLC9A1P19634 815 aa18.71■□□□□ 0.59
COPS7A-202ENST00000455113 TARSP26639 723 aaKnown RBP18.71■□□□□ 0.59
COPS7A-202ENST00000455113 PON1P27169 355 aa18.71■□□□□ 0.59
COPS7A-202ENST00000455113 NHLH1Q02575 133 aa18.71■□□□□ 0.59
COPS7A-202ENST00000455113 TNK2Q07912 1038 aa18.71■□□□□ 0.59
COPS7A-202ENST00000455113 ZNF77Q15935 545 aa18.71■□□□□ 0.59
COPS7A-202ENST00000455113 ARHGAP17Q68EM7 881 aa18.71■□□□□ 0.59
COPS7A-202ENST00000455113 TMEM270Q6UE05 265 aa18.71■□□□□ 0.59
COPS7A-202ENST00000455113 OSCP1Q8WVF1 389 aa18.71■□□□□ 0.59
COPS7A-202ENST00000455113 FAM83CQ9BQN1 747 aa18.71■□□□□ 0.59
COPS7A-202ENST00000455113 EBF3Q9H4W6 596 aa18.71■□□□□ 0.59
COPS7A-202ENST00000455113 IL37Q9NZH6 218 aa18.71■□□□□ 0.59
COPS7A-202ENST00000455113 MTF2Q9Y483 593 aaPredicted RBP18.71■□□□□ 0.59
COPS7A-202ENST00000455113 ITIH6Q6UXX5 1313 aa18.71■□□□□ 0.59
COPS7A-202ENST00000455113 FAM92AA1XBS5 289 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 SPECC1L-ADORA2AF8WAN1 911 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 VDRP11473 427 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 TCF3P15923 654 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 TUBP50607 506 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 SLC7A9P82251 487 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 GCNT1Q02742 428 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 USP4Q13107 963 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 NR1H3Q13133 447 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 ANGPT1Q15389 498 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 SNX30Q5VWJ9 437 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 CPA6Q8N4T0 437 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 SPC24Q8NBT2 197 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 LMO3Q8TAP4 145 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 ATP2A3Q93084 1043 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 PDLIM2Q96JY6 352 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 FAM81BQ96LP2 452 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 LSM14BQ9BX40 385 aaKnown RBP18.7■□□□□ 0.58
COPS7A-202ENST00000455113 INTS2Q9H0H0 1204 aaKnown RBP18.7■□□□□ 0.58
COPS7A-202ENST00000455113 FAM207AQ9NSI2 230 aaPredicted RBP18.7■□□□□ 0.58
COPS7A-202ENST00000455113 GMIPQ9P107 970 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 CPQQ9Y646 472 aa18.7■□□□□ 0.58
COPS7A-202ENST00000455113 LEFTY2O00292 366 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 CTHP32929 405 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 RPS9P46781 194 aaKnown RBP18.69■□□□□ 0.58
COPS7A-202ENST00000455113 TRIM68Q6AZZ1 485 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 TRIM65Q6PJ69 517 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 RRAGAQ7L523 313 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 C1orf210Q8IVY1 113 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 ANKRD52Q8NB46 1076 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 RNF38Q9H0F5 515 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 SPATA6Q9NWH7 488 aaPredicted RBP18.69■□□□□ 0.58
COPS7A-202ENST00000455113 SMPD4Q9NXE4 827 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 DLGAP2Q9P1A6 1054 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 SCML2Q9UQR0 700 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 HELZP42694 1942 aaKnown RBP18.69■□□□□ 0.58
COPS7A-202ENST00000455113 MYO16Q9Y6X6 1858 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 SLC9A3R1O14745 358 aaPredicted RBP18.69■□□□□ 0.58
COPS7A-202ENST00000455113 OLFM2O95897 454 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 PAEPP09466 180 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 SOX9P48436 509 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 PSEN1P49768 467 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 BCAT1P54687 386 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 APBA1Q02410 837 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 GOLGA8FQ08AF8 430 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 GOLGA8DPQ0D2H9 430 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 LRRC32Q14392 662 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 TADA2BQ86TJ2 420 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 UBXN6Q9BZV1 441 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 TSPAN16Q9UKR8 245 aa18.69■□□□□ 0.58
COPS7A-202ENST00000455113 COL4A2P08572 1712 aa18.68■□□□□ 0.58
COPS7A-202ENST00000455113 LAMTOR5O43504 91 aa18.68■□□□□ 0.58
COPS7A-202ENST00000455113 NFATC1O95644 943 aa18.68■□□□□ 0.58
COPS7A-202ENST00000455113 STILQ15468 1287 aa18.68■□□□□ 0.58
COPS7A-202ENST00000455113 GOLGA7BQ2TAP0 167 aa18.68■□□□□ 0.58
COPS7A-202ENST00000455113 DPY19L2P1Q6NXN4 242 aa18.68■□□□□ 0.58
COPS7A-202ENST00000455113 KIAA1958Q8N8K9 716 aa18.68■□□□□ 0.58
COPS7A-202ENST00000455113 NEK11Q8NG66 645 aa18.68■□□□□ 0.58
COPS7A-202ENST00000455113 CLDN23Q96B33 292 aa18.68■□□□□ 0.58
COPS7A-202ENST00000455113 LMAN1LQ9HAT1 526 aa18.68■□□□□ 0.58
COPS7A-202ENST00000455113 SIX2Q9NPC8 291 aa18.68■□□□□ 0.58
COPS7A-202ENST00000455113 SH3BP1Q9Y3L3 701 aa18.68■□□□□ 0.58
COPS7A-202ENST00000455113 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.68■□□□□ 0.58
COPS7A-202ENST00000455113 WNT6Q9Y6F9 365 aa18.68■□□□□ 0.58
COPS7A-202ENST00000455113 PATJQ8NI35 1801 aa18.68■□□□□ 0.58
COPS7A-202ENST00000455113 MUC6Q6W4X9 2439 aa18.68■□□□□ 0.58
COPS7A-202ENST00000455113 COL4A3Q01955 1670 aa18.67■□□□□ 0.58
COPS7A-202ENST00000455113 WDFY4Q6ZS81 3184 aa18.67■□□□□ 0.58
COPS7A-202ENST00000455113 HHLA1C9JL84 531 aa18.67■□□□□ 0.58
COPS7A-202ENST00000455113 EPHB6O15197 1021 aa18.67■□□□□ 0.58
COPS7A-202ENST00000455113 COCHO43405 550 aa18.67■□□□□ 0.58
COPS7A-202ENST00000455113 TLR5O60602 858 aa18.67■□□□□ 0.58
COPS7A-202ENST00000455113 ZDHHC11BP0C7U3 371 aa18.67■□□□□ 0.58
COPS7A-202ENST00000455113 ATP5C1P36542 298 aaKnown RBP18.67■□□□□ 0.58
COPS7A-202ENST00000455113 KIF11P52732 1056 aa18.67■□□□□ 0.58
COPS7A-202ENST00000455113 MFAP3P55082 362 aa18.67■□□□□ 0.58
COPS7A-202ENST00000455113 CCDC173Q0VFZ6 552 aa18.67■□□□□ 0.58
COPS7A-202ENST00000455113 BST2Q10589 180 aaKnown RBP18.67■□□□□ 0.58
COPS7A-202ENST00000455113 PPP2R5DQ14738 602 aa18.67■□□□□ 0.58
COPS7A-202ENST00000455113 ENOSF1Q7L5Y1 443 aa18.67■□□□□ 0.58
COPS7A-202ENST00000455113 GPRIN1Q7Z2K8 1008 aa18.67■□□□□ 0.58
COPS7A-202ENST00000455113 IER2Q9BTL4 223 aa18.67■□□□□ 0.58
COPS7A-202ENST00000455113 CCSER2Q9H7U1 834 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms