RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 PMS2CLQ68D20 193 aa17■□□□□ 0.31
GPC1-206ENST00000455111 ANO7Q6IWH7 933 aa17■□□□□ 0.31
GPC1-206ENST00000455111 CLEC20AQ6ZU45 233 aa17■□□□□ 0.31
GPC1-206ENST00000455111 MIB1Q86YT6 1006 aa17■□□□□ 0.31
GPC1-206ENST00000455111 TXNDC5Q8NBS9 432 aaKnown RBP17■□□□□ 0.31
GPC1-206ENST00000455111 GOLGA5Q8TBA6 731 aa17■□□□□ 0.31
GPC1-206ENST00000455111 TAS1R2Q8TE23 839 aa17■□□□□ 0.31
GPC1-206ENST00000455111 ACDQ96AP0 544 aa17■□□□□ 0.31
GPC1-206ENST00000455111 SMARCD1Q96GM5 515 aa17■□□□□ 0.31
GPC1-206ENST00000455111 CNOT6LQ96LI5 555 aaKnown RBP17■□□□□ 0.31
GPC1-206ENST00000455111 MED10Q9BTT4 135 aa17■□□□□ 0.31
GPC1-206ENST00000455111 MAPK8IP1Q9UQF2 711 aa17■□□□□ 0.31
GPC1-206ENST00000455111 PCDHGA5Q9Y5G8 931 aa17■□□□□ 0.31
GPC1-206ENST00000455111 ADAMTS9Q9P2N4 1935 aa17■□□□□ 0.31
GPC1-206ENST00000455111 E2F8A0AVK6 867 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 BCLAF3A2AJT9 711 aaKnown RBP16.99■□□□□ 0.31
GPC1-206ENST00000455111 PATE3B3GLJ2 98 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 RHOBTB3O94955 611 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 ADH5P11766 374 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 PDIA4P13667 645 aaKnown RBP16.99■□□□□ 0.31
GPC1-206ENST00000455111 TIE1P35590 1138 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 MAP3K7CLP57077 242 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 INCA1Q0VD86 236 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 SGSM1Q2NKQ1 1148 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 AASDHQ4L235 1098 aaPredicted RBP16.99■□□□□ 0.31
GPC1-206ENST00000455111 ZCWPW2Q504Y3 356 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 HECTD3Q5T447 861 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 STPG1Q5TH74 334 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 CEP135Q66GS9 1140 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 TMEM25Q86YD3 366 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 NAT16Q8N8M0 369 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 PDZD8Q8NEN9 1154 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 TSTD1Q8NFU3 115 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 RLN3Q8WXF3 142 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 PNKPQ96T60 521 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 KLF16Q9BXK1 252 aaPredicted RBP16.99■□□□□ 0.31
GPC1-206ENST00000455111 CD248Q9HCU0 757 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 EHD2Q9NZN4 543 aa16.99■□□□□ 0.31
GPC1-206ENST00000455111 MBD1Q9UIS9 605 aaPredicted RBP16.99■□□□□ 0.31
GPC1-206ENST00000455111 MDM4O15151 490 aa16.98■□□□□ 0.31
GPC1-206ENST00000455111 CYP26A1O43174 497 aa16.98■□□□□ 0.31
GPC1-206ENST00000455111 KLF8O95600 359 aaPredicted RBP16.98■□□□□ 0.31
GPC1-206ENST00000455111 ADORA2BP29275 332 aa16.98■□□□□ 0.31
GPC1-206ENST00000455111 EIF2DP41214 584 aaKnown RBP16.98■□□□□ 0.31
GPC1-206ENST00000455111 GCLMP48507 274 aa16.98■□□□□ 0.31
GPC1-206ENST00000455111 TUBP50607 506 aa16.98■□□□□ 0.31
GPC1-206ENST00000455111 MRPS21P82921 87 aaKnown RBP16.98■□□□□ 0.31
GPC1-206ENST00000455111 NFIL3Q16649 462 aa16.98■□□□□ 0.31
GPC1-206ENST00000455111 SEMA4DQ92854 862 aa16.98■□□□□ 0.31
GPC1-206ENST00000455111 DUSP9Q99956 384 aaKnown RBP16.98■□□□□ 0.31
GPC1-206ENST00000455111 ARHGEF4Q9NR80 690 aa16.98■□□□□ 0.31
GPC1-206ENST00000455111 NUDT5Q9UKK9 219 aa16.98■□□□□ 0.31
GPC1-206ENST00000455111 IKBKBO14920 756 aa16.97■□□□□ 0.31
GPC1-206ENST00000455111 HOXC11O43248 304 aaPredicted RBP16.97■□□□□ 0.31
GPC1-206ENST00000455111 TULP3O75386 442 aa16.97■□□□□ 0.31
GPC1-206ENST00000455111 KRT37O76014 449 aa16.97■□□□□ 0.31
GPC1-206ENST00000455111 IRF1P10914 325 aa16.97■□□□□ 0.31
GPC1-206ENST00000455111 VAMP7P51809 220 aa16.97■□□□□ 0.31
GPC1-206ENST00000455111 CREB5Q02930 508 aa16.97■□□□□ 0.31
GPC1-206ENST00000455111 N4BP2L1Q5TBK1 243 aaPredicted RBP16.97■□□□□ 0.31
GPC1-206ENST00000455111 KRBA2Q6ZNG9 492 aa16.97■□□□□ 0.31
GPC1-206ENST00000455111 SCD5Q86SK9 330 aa16.97■□□□□ 0.31
GPC1-206ENST00000455111 UNC93AQ86WB7 457 aa16.97■□□□□ 0.31
GPC1-206ENST00000455111 SMYD4Q8IYR2 804 aaPredicted RBP16.97■□□□□ 0.31
GPC1-206ENST00000455111 TNIP3Q96KP6 325 aa16.97■□□□□ 0.31
GPC1-206ENST00000455111 SPATA32Q96LK8 384 aa16.97■□□□□ 0.31
GPC1-206ENST00000455111 HNRNPABQ99729 332 aaKnown RBP16.97■□□□□ 0.31
GPC1-206ENST00000455111 VPS45Q9NRW7 570 aa16.97■□□□□ 0.31
GPC1-206ENST00000455111 COMMD8Q9NX08 183 aa16.97■□□□□ 0.31
GPC1-206ENST00000455111 LNP1A1A4G5 178 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 SLC9A3R1O14745 358 aaPredicted RBP16.96■□□□□ 0.31
GPC1-206ENST00000455111 MAPK13O15264 365 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 TLR5O60602 858 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 NR2F2P24468 414 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 P2RY2P41231 377 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 PIK3CAP42336 1068 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 SYKP43405 635 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 MAP7D1Q3KQU3 841 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 DDX42Q86XP3 938 aaKnown RBP eCLIP16.96■□□□□ 0.31
GPC1-206ENST00000455111 C12orf50Q8NA57 414 aaPredicted RBP16.96■□□□□ 0.31
GPC1-206ENST00000455111 TAF4BQ92750 862 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 JAKMIP2Q96AA8 810 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 EEF2KMTQ96G04 330 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 ACOX2Q99424 681 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 GDPD2Q9HCC8 539 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 CYLDQ9NQC7 956 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 SPHK2Q9NRA0 654 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 TMEM74BQ9NUR3 256 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 USP25Q9UHP3 1055 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 PCDH15Q96QU1 1955 aa16.96■□□□□ 0.31
GPC1-206ENST00000455111 A0A1W2PQH9 124 aa16.95■□□□□ 0.3
GPC1-206ENST00000455111 CDX4O14627 284 aaPredicted RBP16.95■□□□□ 0.3
GPC1-206ENST00000455111 GIPC1O14908 333 aa16.95■□□□□ 0.3
GPC1-206ENST00000455111 CILPO75339 1184 aa16.95■□□□□ 0.3
GPC1-206ENST00000455111 APODP05090 189 aa16.95■□□□□ 0.3
GPC1-206ENST00000455111 HSP90AA1P07900 732 aaKnown RBP16.95■□□□□ 0.3
GPC1-206ENST00000455111 PMLP29590 882 aa16.95■□□□□ 0.3
GPC1-206ENST00000455111 GRIA2P42262 883 aa16.95■□□□□ 0.3
GPC1-206ENST00000455111 GAD2Q05329 585 aa16.95■□□□□ 0.3
GPC1-206ENST00000455111 TOGARAM2Q6ZUX3 1019 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms