RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 ZNF792Q3KQV3 632 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 CCDC14Q49A88 953 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 FYB2Q5VWT5 728 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 DARS2Q6PI48 645 aaKnown RBP13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 MTHFD1LQ6UB35 978 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 PAXIP1Q6ZW49 1069 aaPredicted RBP13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 APBB1IPQ7Z5R6 666 aaPredicted RBP13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 PNMA8AQ86V59 439 aaPredicted RBP13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 SESTD1Q86VW0 696 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 PQLC3Q8N755 202 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 LRRC52Q8N7C0 313 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 SLC35F5Q8WV83 523 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 HSPH1Q92598 858 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 CENPIQ92674 756 aaPredicted RBP13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 ACAP3Q96P50 834 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 C11orf84Q9BUA3 381 aaPredicted RBP13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 CALN1Q9BXU9 219 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 PCDH18Q9HCL0 1135 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 SLCO1B3Q9NPD5 702 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 TSPAN16Q9UKR8 245 aa13.04□□□□□ -0.32
ECHDC1-209ENST00000454591 E5RJQ4 531 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 GOLGA8MH3BSY2 632 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 APOL1O14791 398 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 T-ENOLP0DO92 83 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 ZFXP17010 805 aaPredicted RBP13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 DESP17661 470 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 ADRA1DP25100 572 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 MAP2K2P36507 400 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 CDC42EP1Q00587 391 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 ADCY1Q08828 1119 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 EFTUD2Q15029 972 aaKnown RBP eCLIP13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 DBN1Q16643 649 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 OR6B2Q6IFH4 312 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 ARMCX2Q7L311 632 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 SLC26A11Q86WA9 606 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 CDR2LQ86X02 465 aaPredicted RBP13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 IGDCC3Q8IVU1 814 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 TCP10LQ8TDR4 215 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 AGAP11Q8TF27 550 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 SPOCK2Q92563 424 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 UTP4Q969X6 686 aaKnown RBP13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 SLC7A6OSQ96CW6 309 aaPredicted RBP13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 ERP27Q96DN0 273 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 PAIP2Q9BPZ3 127 aaKnown RBP13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 C16orf70Q9BSU1 422 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 GEMIN8Q9NWZ8 242 aaKnown RBP13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 NOP53Q9NZM5 478 aaKnown RBP13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 GGT7Q9UJ14 662 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 TTLL3Q9Y4R7 772 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 ZNF236Q9UL36 1845 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 KBTBD13C9JR72 458 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 ADM5C9JUS6 153 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 E7ENQ6 273 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 GCATO75600 419 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 MT-ND3P03897 115 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 CYP2C8P10632 490 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 PSMC4P43686 418 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 NR2C2P49116 596 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 YWHAZP63104 245 aaKnown RBP13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 BASP1P80723 227 aaKnown RBP13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 MMRN1Q13201 1228 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 PTK7Q13308 1070 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 DPYSL2Q16555 572 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 CTC1Q2NKJ3 1217 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 HP1BP3Q5SSJ5 553 aaPredicted RBP13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 TTC39BQ5VTQ0 682 aaPredicted RBP13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 NPNTQ6UXI9 565 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 SLC26A9Q7LBE3 791 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 NLRP9Q7RTR0 991 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 CDKL3Q8IVW4 592 aaPredicted RBP13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 RAB3IL1Q8TBN0 382 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 MTBPQ96DY7 904 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 KATNBL1Q9H079 304 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 KLC2Q9H0B6 622 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 MANSC1Q9H8J5 431 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 C10orf88Q9H8K7 445 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 ETNK1Q9HBU6 452 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 POPDC2Q9HBU9 364 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 PDGFCQ9NRA1 345 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 KANSL3Q9P2N6 904 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 CHMP2BQ9UQN3 213 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 SLC45A1Q9Y2W3 748 aa13.03□□□□□ -0.32
ECHDC1-209ENST00000454591 TRIP11Q15643 1979 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 H7C0C1 242 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 ZNF189O75820 626 aaPredicted RBP13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 ATP5BP06576 529 aaKnown RBP13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 INHBAP08476 426 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 SDC4P31431 198 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 ATP5OP48047 213 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 ATP11AP98196 1134 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 SF3A3Q12874 501 aaKnown RBP eCLIP13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 ORC1Q13415 861 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 PRKD1Q15139 912 aaPredicted RBP13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 GOLGA7BQ2TAP0 167 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 WASHC2DQ5SRD0 308 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 CAPN12Q6ZSI9 719 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 LIMS2Q7Z4I7 341 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 TTC30AQ86WT1 665 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 PSTKQ8IV42 348 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms