RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 CACNA1IQ9P0X4 2223 aa16.32■□□□□ 0.2
VPS8-213ENST00000453056 NAGPAQ9UK23 515 aa16.32■□□□□ 0.2
VPS8-213ENST00000453056 SIT1Q9Y3P8 196 aa16.32■□□□□ 0.2
VPS8-213ENST00000453056 USP3Q9Y6I4 520 aa16.32■□□□□ 0.2
VPS8-213ENST00000453056 A0A1W2PQH9 124 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 SMTNL1A8MU46 457 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 RNF225M0QZC1 329 aaPredicted RBP16.31■□□□□ 0.2
VPS8-213ENST00000453056 LEFTY2O00292 366 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 NCAM2O15394 837 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 THAP12O43422 761 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 MAGEA9P43362 315 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 TKTL1P51854 596 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 AMPD2Q01433 879 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 ADIGQ0VDE8 80 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 SKOR2Q2VWA4 1001 aaPredicted RBP16.31■□□□□ 0.2
VPS8-213ENST00000453056 RAB41Q5JT25 222 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 IER5LQ5T953 404 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 RALGPS2Q86X27 583 aaPredicted RBP16.31■□□□□ 0.2
VPS8-213ENST00000453056 TMEM105Q8N8V8 129 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 UBA3Q8TBC4 463 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 EXOC4Q96A65 974 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 FAM83CQ9BQN1 747 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 RNF38Q9H0F5 515 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 VPS16Q9H269 839 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 SIX2Q9NPC8 291 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 CFAP97Q9P2B7 532 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 DNAJC12Q9UKB3 198 aa16.31■□□□□ 0.2
VPS8-213ENST00000453056 MYOFQ9NZM1 2061 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 LGALS16A8MUM7 142 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 BECN2A8MW95 431 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 NFATC1O95644 943 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 ZBED1O96006 694 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 CTHP32929 405 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 COPB1P53618 953 aaKnown RBP16.3■□□□□ 0.2
VPS8-213ENST00000453056 APBA1Q02410 837 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 TNK2Q07912 1038 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 RUNX3Q13761 415 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 RAPGEF1Q13905 1077 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 PKDCCQ504Y2 493 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 C10orf120Q5SQS8 335 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 KLHDC10Q6PID8 442 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 RIN3Q8TB24 985 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 KCTD13Q8WZ19 329 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 FAM3CQ92520 227 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 SECISBP2LQ93073 1101 aaKnown RBP16.3■□□□□ 0.2
VPS8-213ENST00000453056 ULBP1Q9BZM6 244 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 EBF3Q9H4W6 596 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 CNGB3Q9NQW8 809 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 GTSE1Q9NYZ3 720 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 CLIC5Q9NZA1 410 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 LIMA1Q9UHB6 759 aaKnown RBP16.3■□□□□ 0.2
VPS8-213ENST00000453056 SH3BP1Q9Y3L3 701 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 DAAM1Q9Y4D1 1078 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 WNT6Q9Y6F9 365 aa16.3■□□□□ 0.2
VPS8-213ENST00000453056 SYCE3A1L190 88 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 FAM170BA6NMN3 283 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 SPECC1L-ADORA2AF8WAN1 911 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 TULP2O00295 520 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 RARGP13631 454 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 ARSAP15289 507 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 ZNF18P17022 549 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 ATP5C1P36542 298 aaKnown RBP16.29■□□□□ 0.2
VPS8-213ENST00000453056 ZNF165P49910 485 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 BPIFB4P59827 614 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 PTK2Q05397 1052 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 NR1H3Q13133 447 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 NCAPHQ15003 741 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 KLHDC7AQ5VTJ3 777 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 TRIM68Q6AZZ1 485 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 RSRC2Q7L4I2 434 aaKnown RBP16.29■□□□□ 0.2
VPS8-213ENST00000453056 CCDC105Q8IYK2 499 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 HSFY1Q96LI6 401 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 NMUR1Q9HB89 426 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 PLCB1Q9NQ66 1216 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 HPS4Q9NQG7 708 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.29■□□□□ 0.2
VPS8-213ENST00000453056 TBC1D14Q9P2M4 693 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 DNMT3LQ9UJW3 386 aa16.29■□□□□ 0.2
VPS8-213ENST00000453056 LSM7Q9UK45 103 aaKnown RBP16.29■□□□□ 0.2
VPS8-213ENST00000453056 NDRG2Q9UN36 371 aaKnown RBP16.29■□□□□ 0.2
VPS8-213ENST00000453056 ARIH1Q9Y4X5 557 aaPredicted RBP16.29■□□□□ 0.2
VPS8-213ENST00000453056 COL4A3Q01955 1670 aa16.28■□□□□ 0.2
VPS8-213ENST00000453056 E2F8A0AVK6 867 aa16.28■□□□□ 0.2
VPS8-213ENST00000453056 SART1O43290 800 aaKnown RBP16.28■□□□□ 0.2
VPS8-213ENST00000453056 GALR2O43603 387 aaPredicted RBP16.28■□□□□ 0.2
VPS8-213ENST00000453056 FBXO21O94952 628 aa16.28■□□□□ 0.2
VPS8-213ENST00000453056 DCNP07585 359 aaKnown RBP16.28■□□□□ 0.2
VPS8-213ENST00000453056 UCHL3P15374 230 aa16.28■□□□□ 0.2
VPS8-213ENST00000453056 CD72P21854 359 aa16.28■□□□□ 0.2
VPS8-213ENST00000453056 TARSP26639 723 aaKnown RBP16.28■□□□□ 0.2
VPS8-213ENST00000453056 SOX9P48436 509 aa16.28■□□□□ 0.2
VPS8-213ENST00000453056 RGS7P49802 495 aa16.28■□□□□ 0.2
VPS8-213ENST00000453056 YWHAGP61981 247 aaKnown RBP eCLIP16.28■□□□□ 0.2
VPS8-213ENST00000453056 TPM4P67936 248 aa16.28■□□□□ 0.2
VPS8-213ENST00000453056 LRRC32Q14392 662 aa16.28■□□□□ 0.2
VPS8-213ENST00000453056 EML3Q32P44 896 aa16.28■□□□□ 0.2
VPS8-213ENST00000453056 PM20D1Q6GTS8 502 aa16.28■□□□□ 0.2
VPS8-213ENST00000453056 SCD5Q86SK9 330 aa16.28■□□□□ 0.2
VPS8-213ENST00000453056 ZNF276Q8N554 614 aa16.28■□□□□ 0.2
VPS8-213ENST00000453056 TTC8Q8TAM2 541 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms