RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 GPR161Q8N6U8 529 aaKnown RBP13.18□□□□□ -0.3
CPSF4-208ENST00000452047 TSG101Q99816 390 aa13.18□□□□□ -0.3
CPSF4-208ENST00000452047 GTPBP4Q9BZE4 634 aaKnown RBP13.18□□□□□ -0.3
CPSF4-208ENST00000452047 FAM124BQ9H5Z6 455 aaPredicted RBP13.18□□□□□ -0.3
CPSF4-208ENST00000452047 PARD6AQ9NPB6 346 aa13.18□□□□□ -0.3
CPSF4-208ENST00000452047 CYLDQ9NQC7 956 aa13.18□□□□□ -0.3
CPSF4-208ENST00000452047 TLR8Q9NR97 1041 aaKnown RBP13.18□□□□□ -0.3
CPSF4-208ENST00000452047 OSER1Q9NX31 292 aa13.18□□□□□ -0.3
CPSF4-208ENST00000452047 GMEB2Q9UKD1 530 aa13.18□□□□□ -0.3
CPSF4-208ENST00000452047 RAB23Q9ULC3 237 aa13.18□□□□□ -0.3
CPSF4-208ENST00000452047 SLC8A2Q9UPR5 921 aa13.18□□□□□ -0.3
CPSF4-208ENST00000452047 SCML2Q9UQR0 700 aa13.18□□□□□ -0.3
CPSF4-208ENST00000452047 COQ4Q9Y3A0 265 aa13.18□□□□□ -0.3
CPSF4-208ENST00000452047 RALGAPA1Q6GYQ0 2036 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 ANTXRLA6NF34 631 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 K7EQS6 105 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 CYP26A1O43174 497 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 GREM1O60565 184 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 CD44P16070 742 aaKnown RBP13.17□□□□□ -0.3
CPSF4-208ENST00000452047 EIF2DP41214 584 aaKnown RBP13.17□□□□□ -0.3
CPSF4-208ENST00000452047 KIF11P52732 1056 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 RAD23BP54727 409 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 ZNF394Q53GI3 561 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 DCAF17Q5H9S7 520 aaPredicted RBP13.17□□□□□ -0.3
CPSF4-208ENST00000452047 C12orf40Q86WS4 652 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 SFTPA1Q8IWL2 248 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 TTC39CQ8N584 583 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 CAMKK1Q8N5S9 505 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 SLC4A11Q8NBS3 891 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 USP33Q8TEY7 942 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 TATDN2Q93075 761 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 WBP2Q969T9 261 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 SLC35C1Q96A29 364 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 JAKMIP2Q96AA8 810 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 ACDQ96AP0 544 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 OTUB2Q96DC9 234 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 HHIPQ96QV1 700 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 DUSP16Q9BY84 665 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 CISHQ9NSE2 258 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 DLL3Q9NYJ7 618 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 TBC1D14Q9P2M4 693 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 HOOK1Q9UJC3 728 aaKnown RBP13.17□□□□□ -0.3
CPSF4-208ENST00000452047 MAN1B1Q9UKM7 699 aa13.17□□□□□ -0.3
CPSF4-208ENST00000452047 LRP3O75074 770 aa13.16□□□□□ -0.3
CPSF4-208ENST00000452047 TBX18O95935 607 aa13.16□□□□□ -0.3
CPSF4-208ENST00000452047 ADH1CP00326 375 aa13.16□□□□□ -0.3
CPSF4-208ENST00000452047 RETP07949 1114 aa13.16□□□□□ -0.3
CPSF4-208ENST00000452047 ADH5P11766 374 aa13.16□□□□□ -0.3
CPSF4-208ENST00000452047 ACO1P21399 889 aaKnown RBP13.16□□□□□ -0.3
CPSF4-208ENST00000452047 BMP6P22004 513 aa13.16□□□□□ -0.3
CPSF4-208ENST00000452047 SLC6A11P48066 632 aa13.16□□□□□ -0.3
CPSF4-208ENST00000452047 DMC1Q14565 340 aa13.16□□□□□ -0.3
CPSF4-208ENST00000452047 LY6G5CQ5SRR4 150 aa13.16□□□□□ -0.3
CPSF4-208ENST00000452047 TCERG1LQ5VWI1 586 aa13.16□□□□□ -0.3
CPSF4-208ENST00000452047 ERMP1Q7Z2K6 904 aa13.16□□□□□ -0.3
CPSF4-208ENST00000452047 BBS7Q8IWZ6 715 aa13.16□□□□□ -0.3
CPSF4-208ENST00000452047 PHTF2Q8N3S3 785 aa13.16□□□□□ -0.3
CPSF4-208ENST00000452047 FAM160A2Q8N612 972 aaPredicted RBP13.16□□□□□ -0.3
CPSF4-208ENST00000452047 GAB3Q8WWW8 586 aa13.16□□□□□ -0.3
CPSF4-208ENST00000452047 NMUR1Q9HB89 426 aa13.16□□□□□ -0.3
CPSF4-208ENST00000452047 ARMCX3Q9UH62 379 aaPredicted RBP13.16□□□□□ -0.3
CPSF4-208ENST00000452047 SH3BP1Q9Y3L3 701 aa13.16□□□□□ -0.3
CPSF4-208ENST00000452047 USP3Q9Y6I4 520 aa13.16□□□□□ -0.3
CPSF4-208ENST00000452047 A0A0A0MRY4 1105 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 A0A1W2PQH9 124 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 PSMA7O14818 248 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 HOXC11O43248 304 aaPredicted RBP13.15□□□□□ -0.3
CPSF4-208ENST00000452047 GADD45BO75293 160 aaPredicted RBP13.15□□□□□ -0.3
CPSF4-208ENST00000452047 RPP40O75818 363 aaKnown RBP13.15□□□□□ -0.3
CPSF4-208ENST00000452047 IRF1P10914 325 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 LMNB2Q03252 620 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 SPEM2Q0P670 501 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 ARHGAP17Q68EM7 881 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 ISM2Q6H9L7 571 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 TTI2Q6NXR4 508 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 KLHDC10Q6PID8 442 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 CEP68Q76N32 757 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 CCDC186Q7Z3E2 898 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.15□□□□□ -0.3
CPSF4-208ENST00000452047 SCD5Q86SK9 330 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 ETFBKMTQ8IXQ9 262 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 CCDC26Q8TAB7 109 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 TMEM176AQ96HP8 235 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 DHTKD1Q96HY7 919 aaPredicted RBP13.15□□□□□ -0.3
CPSF4-208ENST00000452047 HEXIM2Q96MH2 286 aaKnown RBP13.15□□□□□ -0.3
CPSF4-208ENST00000452047 PNKPQ96T60 521 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 KLF16Q9BXK1 252 aaPredicted RBP13.15□□□□□ -0.3
CPSF4-208ENST00000452047 DNAI2Q9GZS0 605 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 NACA2Q9H009 215 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.15□□□□□ -0.3
CPSF4-208ENST00000452047 EBF1Q9UH73 591 aa13.15□□□□□ -0.3
CPSF4-208ENST00000452047 SDK1Q7Z5N4 2213 aa13.15□□□□□ -0.31
CPSF4-208ENST00000452047 AXIN1O15169 862 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 KAT7O95251 611 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 APBB3O95704 486 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 RARGP13631 454 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 ATP5C1P36542 298 aaKnown RBP13.14□□□□□ -0.31
CPSF4-208ENST00000452047 PPP1R2P41236 205 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 SEC13P55735 322 aa13.14□□□□□ -0.31
CPSF4-208ENST00000452047 FOXK2Q01167 660 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms