RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 BTBD8Q5XKL5 378 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 KLHDC10Q6PID8 442 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 RSRC2Q7L4I2 434 aaKnown RBP12.67□□□□□ -0.38
SMPD4-212ENST00000451542 RALGPS2Q86X27 583 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-212ENST00000451542 ZNF276Q8N554 614 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 ZNF606Q8WXB4 792 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 ATP2A3Q93084 1043 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 RSPRY1Q96DX4 576 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 TRIM62Q9BVG3 475 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 OSBPL6Q9BZF3 934 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 IRF2BPLQ9H1B7 796 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 PLCB1Q9NQ66 1216 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 CYLDQ9NQC7 956 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 CNGB3Q9NQW8 809 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 HEBP1Q9NRV9 189 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 LSM7Q9UK45 103 aaKnown RBP12.67□□□□□ -0.38
SMPD4-212ENST00000451542 STRIP2Q9ULQ0 834 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 SIT1Q9Y3P8 196 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 CPQQ9Y646 472 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 PIAS3Q9Y6X2 628 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 ZDBF2Q9HCK1 2354 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 MYO16Q9Y6X6 1858 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 C5orf42Q9H799 3197 aa12.67□□□□□ -0.38
SMPD4-212ENST00000451542 LGALS16A8MUM7 142 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 LEFTY2O00292 366 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 CYP26A1O43174 497 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 COCHO43405 550 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 FBXO21O94952 628 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 NFATC1O95644 943 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 RARGP13631 454 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 UCHL3P15374 230 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 ZNF18P17022 549 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 KRT9P35527 623 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 KCNMA1Q12791 1236 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 USP4Q13107 963 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 RUNX3Q13761 415 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 UBXN2BQ14CS0 331 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 NCAPHQ15003 741 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 ZNF77Q15935 545 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 C10orf120Q5SQS8 335 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 KLHDC7AQ5VTJ3 777 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 GJB7Q6PEY0 223 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 GPRIN1Q7Z2K8 1008 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 FMNL3Q8IVF7 1028 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 NEK11Q8NG66 645 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 STK32AQ8WU08 396 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 RNF139Q8WU17 664 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 SLC35F5Q8WV83 523 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 OSCP1Q8WVF1 389 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 IRGQQ8WZA9 623 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 TFAP2BQ92481 460 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 FAM3CQ92520 227 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 SECISBP2LQ93073 1101 aaKnown RBP12.66□□□□□ -0.38
SMPD4-212ENST00000451542 OTUB2Q96DC9 234 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 SPAG5Q96R06 1193 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 SLC22A12Q96S37 553 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 STK33Q9BYT3 514 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 RNF38Q9H0F5 515 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 ST7Q9NRC1 585 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 OLA1Q9NTK5 396 aaKnown RBP12.66□□□□□ -0.38
SMPD4-212ENST00000451542 SMPD4Q9NXE4 827 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 DNMT3LQ9UJW3 386 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 CCL26Q9Y258 94 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 F5P12259 2224 aa12.66□□□□□ -0.38
SMPD4-212ENST00000451542 A0A1W2PQH9 124 aa12.65□□□□□ -0.38
SMPD4-212ENST00000451542 E2F8A0AVK6 867 aa12.65□□□□□ -0.38
SMPD4-212ENST00000451542 FOXN3O00409 490 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-212ENST00000451542 PDGFBP01127 241 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-212ENST00000451542 CCDC172P0C7W6 258 aa12.65□□□□□ -0.38
SMPD4-212ENST00000451542 YWHAGP61981 247 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMPD4-212ENST00000451542 COG7P83436 770 aa12.65□□□□□ -0.38
SMPD4-212ENST00000451542 ADIGQ0VDE8 80 aa12.65□□□□□ -0.38
SMPD4-212ENST00000451542 LRRC32Q14392 662 aa12.65□□□□□ -0.38
SMPD4-212ENST00000451542 DRAP1Q14919 205 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-212ENST00000451542 PKDCCQ504Y2 493 aa12.65□□□□□ -0.38
SMPD4-212ENST00000451542 PM20D1Q6GTS8 502 aa12.65□□□□□ -0.38
SMPD4-212ENST00000451542 FAM71AQ8IYT1 594 aa12.65□□□□□ -0.38
SMPD4-212ENST00000451542 SCML4Q8N228 414 aa12.65□□□□□ -0.38
SMPD4-212ENST00000451542 ZFYVE19Q96K21 471 aa12.65□□□□□ -0.38
SMPD4-212ENST00000451542 FAM83CQ9BQN1 747 aa12.65□□□□□ -0.38
SMPD4-212ENST00000451542 DDX23Q9BUQ8 820 aaKnown RBP12.65□□□□□ -0.38
SMPD4-212ENST00000451542 ULBP1Q9BZM6 244 aa12.65□□□□□ -0.38
SMPD4-212ENST00000451542 CCSER2Q9H7U1 834 aa12.65□□□□□ -0.38
SMPD4-212ENST00000451542 LTB4R2Q9NPC1 389 aa12.65□□□□□ -0.38
SMPD4-212ENST00000451542 SIX2Q9NPC8 291 aa12.65□□□□□ -0.38
SMPD4-212ENST00000451542 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMPD4-212ENST00000451542 CFAP97Q9P2B7 532 aa12.65□□□□□ -0.38
SMPD4-212ENST00000451542 HELZP42694 1942 aaKnown RBP12.64□□□□□ -0.39
SMPD4-212ENST00000451542 TICRRQ7Z2Z1 1910 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 FAM170BA6NMN3 283 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 SPECC1L-ADORA2AF8WAN1 911 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 ARNTLO00327 626 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 ADH1CP00326 375 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 SERPINC1P01008 464 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 LCP1P13796 627 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 COL9A1P20849 921 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 RGS7P49802 495 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 SYCP1Q15431 976 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 ZSCAN23Q3MJ62 389 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 CACNA2D4Q7Z3S7 1137 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms