RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 NELL2Q99435 816 aa13.74□□□□□ -0.21
SNRNP27-203ENST00000450162 NACA2Q9H009 215 aa13.74□□□□□ -0.21
SNRNP27-203ENST00000450162 RNF38Q9H0F5 515 aa13.74□□□□□ -0.21
SNRNP27-203ENST00000450162 GANQ9H2C0 597 aa13.74□□□□□ -0.21
SNRNP27-203ENST00000450162 LHX5Q9H2C1 402 aa13.74□□□□□ -0.21
SNRNP27-203ENST00000450162 MFSD1Q9H3U5 465 aa13.74□□□□□ -0.21
SNRNP27-203ENST00000450162 SMOC2Q9H3U7 446 aa13.74□□□□□ -0.21
SNRNP27-203ENST00000450162 C11orf16Q9NQ32 467 aa13.74□□□□□ -0.21
SNRNP27-203ENST00000450162 ARHGEF3Q9NR81 526 aa13.74□□□□□ -0.21
SNRNP27-203ENST00000450162 FAM207AQ9NSI2 230 aaPredicted RBP13.74□□□□□ -0.21
SNRNP27-203ENST00000450162 PCDHGC3Q9UN70 934 aa13.74□□□□□ -0.21
SNRNP27-203ENST00000450162 FHOD1Q9Y613 1164 aa13.74□□□□□ -0.21
SNRNP27-203ENST00000450162 TECTAO75443 2155 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 DENND4CQ5VZ89 1909 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 A0A1B0GTH6 734 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 A0A1W2PQC6 194 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 F8VZ95 297 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 MAN2B1O00754 1011 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 SLC9A3R1O14745 358 aaPredicted RBP13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 COCHO43405 550 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 SERPINC1P01008 464 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 MBL2P11226 248 aaPredicted RBP13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 CLCN1P35523 988 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 CLCN5P51795 746 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 STARD6P59095 220 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 POLR2FP61218 127 aaKnown RBP13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 AMPD2Q01433 879 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 GOLGA8FQ08AF8 430 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 GOLGA8DPQ0D2H9 430 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 USP4Q13107 963 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 MLF2Q15773 248 aaPredicted RBP13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 ZNF77Q15935 545 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 PMF1Q6P1K2 205 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 LRSAM1Q6UWE0 723 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 LUZP1Q86V48 1076 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 ZNF677Q86XU0 584 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 SUGP1Q8IWZ8 645 aaKnown RBP13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 SIX5Q8N196 739 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 FBXL6Q8N531 539 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 SH3RF2Q8TEC5 729 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 LRRC3BQ96PB8 259 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 SPAG5Q96R06 1193 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 FAM83CQ9BQN1 747 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 LRFN3Q9BTN0 628 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 TRIM62Q9BVG3 475 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 SMG9Q9H0W8 520 aaKnown RBP13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 C8orf33Q9H7E9 229 aaPredicted RBP13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 OLA1Q9NTK5 396 aaKnown RBP13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.73□□□□□ -0.213e-7■■■■■ 96.8
SNRNP27-203ENST00000450162 TBC1D14Q9P2M4 693 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 DNMT3LQ9UJW3 386 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 NAGPAQ9UK23 515 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 CCL26Q9Y258 94 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 MRPS17Q9Y2R5 130 aaKnown RBP13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 CEP83Q9Y592 693 aa13.73□□□□□ -0.21
SNRNP27-203ENST00000450162 MYH10P35580 1976 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 NUP210Q8TEM1 1887 aaPredicted RBP13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 A0A1W2PQH9 124 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 E2F8A0AVK6 867 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 LEFTY2O00292 366 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 TULP2O00295 520 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 ARNTLO00327 626 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 CCDC172P0C7W6 258 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 RARGP13631 454 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 STAT1P42224 750 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 NUBP1P53384 320 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 YWHAGP61981 247 aaKnown RBP eCLIP13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 ADIGQ0VDE8 80 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 MTF1Q14872 753 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 HFE2Q6ZVN8 426 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 SCD5Q86SK9 330 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 TMEM110Q86TL2 294 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 GPIHBP1Q8IV16 184 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 OSCP1Q8WVF1 389 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 GOLGA1Q92805 767 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 EXOC4Q96A65 974 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 OTUB2Q96DC9 234 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 DDX23Q9BUQ8 820 aaKnown RBP13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 SLC4A5Q9BY07 1137 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 OSBPL6Q9BZF3 934 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 ULBP1Q9BZM6 244 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 TSPY26PQ9H489 355 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 CCSER2Q9H7U1 834 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 GKN1Q9NS71 199 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 ABCC13Q9NSE7 274 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 MYO6Q9UM54 1294 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 CPQQ9Y646 472 aa13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 ZNF638Q14966 1978 aaKnown RBP13.72□□□□□ -0.21
SNRNP27-203ENST00000450162 KRBA1A5PL33 1030 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 CYP11B1P15538 503 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 SOX5P35711 763 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 IFNAR2P48551 515 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 JAM2P57087 298 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 DAOAP59103 153 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 COG7P83436 770 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 NR1H3Q13133 447 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 NR1I3Q14994 352 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 ITPRIPL2Q3MIP1 535 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 C10orf120Q5SQS8 335 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 BTBD8Q5XKL5 378 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms