RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 ABHD14A-ACY1A0A1B0GW23 586 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 KIAA0355O15063 1070 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 DGKIO75912 1065 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 NOS2P35228 1153 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 BCAR1P56945 870 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 DAOAP59103 153 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 TRADDQ15628 312 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 SLC39A12Q504Y0 691 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 KAZNQ674X7 775 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 EMBQ6PCB8 327 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 STRADAQ7RTN6 431 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 HDXQ7Z353 690 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 GSPT2Q8IYD1 628 aaKnown RBP14.9□□□□□ -0.02
USP39-207ENST00000450066 DEFB106AQ8N104 65 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 ATG4AQ8WYN0 398 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 HSPH1Q92598 858 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 NT5C3BQ969T7 300 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 POPDC2Q9HBU9 364 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.9□□□□□ -0.02
USP39-207ENST00000450066 HCSTQ9UBK5 93 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 NFU1Q9UMS0 254 aa14.9□□□□□ -0.02
USP39-207ENST00000450066 FNDC1Q4ZHG4 1894 aaPredicted RBP14.9□□□□□ -0.02
USP39-207ENST00000450066 TRIM43BA6NCK2 446 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 MDM4O15151 490 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 ENDOD1O94919 500 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 UPP2O95045 317 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 ZBED1O96006 694 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 TFE3P19532 575 aaPredicted RBP14.89□□□□□ -0.03
USP39-207ENST00000450066 RABGGTBP53611 331 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 DRG2P55039 364 aaKnown RBP14.89□□□□□ -0.03
USP39-207ENST00000450066 NFE2Q16621 373 aaPredicted RBP14.89□□□□□ -0.03
USP39-207ENST00000450066 DUPD1Q68J44 220 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 PM20D1Q6GTS8 502 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 SCYL2Q6P3W7 929 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 FUT10Q6P4F1 479 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 SCML4Q8N228 414 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 TRIM43Q96BQ3 446 aaPredicted RBP14.89□□□□□ -0.03
USP39-207ENST00000450066 TRIM51Q9BSJ1 452 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 ADAM33Q9BZ11 813 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 FAM114A2Q9NRY5 505 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 KIAA0100Q14667 2235 aaKnown RBP14.89□□□□□ -0.03
USP39-207ENST00000450066 OR6C75A6NL08 312 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 ECEL1O95672 775 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 CD48P09326 243 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 ITGB8P26012 769 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 KCNJ1P48048 391 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 ARSEP51690 589 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 SNX1Q13596 522 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 PDK2Q15119 407 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 DCAF6Q58WW2 860 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 ZNF280DQ6N043 979 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 DRICH1Q6PGQ1 229 aaPredicted RBP14.89□□□□□ -0.03
USP39-207ENST00000450066 CEP57Q86XR8 500 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 MAP7D3Q8IWC1 876 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 ATL2Q8NHH9 583 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 GRK7Q8WTQ7 553 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 IRGQQ8WZA9 623 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 TOP1MTQ969P6 601 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 FUBP3Q96I24 572 aaKnown RBP eCLIP14.89□□□□□ -0.03
USP39-207ENST00000450066 STAP1Q9ULZ2 295 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 NLRC5Q86WI3 1866 aa14.89□□□□□ -0.03
USP39-207ENST00000450066 YJEFN3A6XGL0 299 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 E7ENQ6 273 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 MAP2K7O14733 419 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 DAPK3O43293 454 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 OR4Q2P0C623 313 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 USP17L7P0C7H9 530 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 HSPA1AP0DMV8 641 aaKnown RBP14.88□□□□□ -0.03
USP39-207ENST00000450066 HSPA1BP0DMV9 641 aaKnown RBP14.88□□□□□ -0.03
USP39-207ENST00000450066 CTXN3Q4LDR2 81 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 SYDE1Q6ZW31 735 aaPredicted RBP14.88□□□□□ -0.03
USP39-207ENST00000450066 BBS12Q6ZW61 710 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 BNIPLQ7Z465 357 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 VSIG1Q86XK7 387 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 CAVIN3Q969G5 261 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 NPY6RQ99463 290 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 CALN1Q9BXU9 219 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 PRDM5Q9NQX1 630 aaPredicted RBP14.88□□□□□ -0.03
USP39-207ENST00000450066 USP3Q9Y6I4 520 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 PTPRDP23468 1912 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 NT5C1B-RDH14C9J2C7 533 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 EFCAB14O75071 495 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 SASH3O75995 380 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 FYNP06241 537 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 CSF2RAP15509 400 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 CYP2F1P24903 491 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 ECHS1P30084 290 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 ALDH7A1P49419 539 aaKnown RBP14.88□□□□□ -0.03
USP39-207ENST00000450066 CDH6P55285 790 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 NNTQ13423 1086 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 CASP8Q14790 479 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 ERMARDQ5T6L9 678 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 MFSD5Q6N075 450 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 HFE2Q6ZVN8 426 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 BHLHA9Q7RTU4 235 aa14.88□□□□□ -0.03
USP39-207ENST00000450066 DDX42Q86XP3 938 aaKnown RBP eCLIP14.88□□□□□ -0.03
USP39-207ENST00000450066 SNRNP25Q9BV90 132 aaKnown RBP14.88□□□□□ -0.03
USP39-207ENST00000450066 OXCT2Q9BYC2 517 aaPredicted RBP14.88□□□□□ -0.03
USP39-207ENST00000450066 FRMD8P1Q9BZ68 369 aaPredicted RBP14.88□□□□□ -0.03
USP39-207ENST00000450066 VWA8A3KMH1 1905 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms