RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 GOLGA8FQ08AF8 430 aa16.12■□□□□ 0.17
CHD3-205ENST00000449744 GOLGA8DPQ0D2H9 430 aa16.12■□□□□ 0.17
CHD3-205ENST00000449744 CCDC40Q4G0X9 1142 aa16.12■□□□□ 0.17
CHD3-205ENST00000449744 PPP1R26Q5T8A7 1209 aaPredicted RBP16.12■□□□□ 0.17
CHD3-205ENST00000449744 LAIR1Q6GTX8 287 aa16.12■□□□□ 0.17
CHD3-205ENST00000449744 GPRIN1Q7Z2K8 1008 aa16.12■□□□□ 0.17
CHD3-205ENST00000449744 TATDN2Q93075 761 aa16.12■□□□□ 0.17
CHD3-205ENST00000449744 OTUB2Q96DC9 234 aa16.12■□□□□ 0.17
CHD3-205ENST00000449744 CEP63Q96MT8 703 aa16.12■□□□□ 0.17
CHD3-205ENST00000449744 DUSP16Q9BY84 665 aa16.12■□□□□ 0.17
CHD3-205ENST00000449744 FAM124BQ9H5Z6 455 aaPredicted RBP16.12■□□□□ 0.17
CHD3-205ENST00000449744 VPS13AQ96RL7 3174 aa16.11■□□□□ 0.17
CHD3-205ENST00000449744 BICDL2A1A5D9 508 aa16.11■□□□□ 0.17
CHD3-205ENST00000449744 HHLA1C9JL84 531 aa16.11■□□□□ 0.17
CHD3-205ENST00000449744 CYP26A1O43174 497 aa16.11■□□□□ 0.17
CHD3-205ENST00000449744 GADD45BO75293 160 aaPredicted RBP16.11■□□□□ 0.17
CHD3-205ENST00000449744 ADH5P11766 374 aa16.11■□□□□ 0.17
CHD3-205ENST00000449744 PXNP49023 591 aaPredicted RBP16.11■□□□□ 0.17
CHD3-205ENST00000449744 SLC8A3P57103 927 aa16.11■□□□□ 0.17
CHD3-205ENST00000449744 GAD2Q05329 585 aa16.11■□□□□ 0.17
CHD3-205ENST00000449744 SRSF5Q13243 272 aaKnown RBP16.11■□□□□ 0.17
CHD3-205ENST00000449744 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.11■□□□□ 0.17
CHD3-205ENST00000449744 CAMKK1Q8N5S9 505 aa16.11■□□□□ 0.17
CHD3-205ENST00000449744 ZFRQ96KR1 1074 aaKnown RBP16.11■□□□□ 0.17
CHD3-205ENST00000449744 ARID3AQ99856 593 aa16.11■□□□□ 0.17
CHD3-205ENST00000449744 USP18Q9UMW8 372 aa16.11■□□□□ 0.17
CHD3-205ENST00000449744 COQ4Q9Y3A0 265 aa16.11■□□□□ 0.17
CHD3-205ENST00000449744 CCDC163A0A0D9SF12 145 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.1■□□□□ 0.17
CHD3-205ENST00000449744 BIN1O00499 593 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 CD44P16070 742 aaKnown RBP16.1■□□□□ 0.17
CHD3-205ENST00000449744 HOXC13P31276 330 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 EIF2DP41214 584 aaKnown RBP16.1■□□□□ 0.17
CHD3-205ENST00000449744 PGFP49763 221 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 PSEN1P49768 467 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 KIF11P52732 1056 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 RAD23BP54727 409 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 SEC13P55735 322 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 CETN1Q12798 172 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 LRMPQ12912 555 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 CUL2Q13617 745 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 DMC1Q14565 340 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 LY6G5CQ5SRR4 150 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 BTBD8Q5XKL5 378 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 ARHGAP17Q68EM7 881 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 RHBDF2Q6PJF5 856 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 SYT13Q7L8C5 426 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 TADA2BQ86TJ2 420 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 SLC4A11Q8NBS3 891 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 NELFBQ8WX92 580 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 EZH1Q92800 747 aaPredicted RBP16.1■□□□□ 0.17
CHD3-205ENST00000449744 SLC35C1Q96A29 364 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 PNKPQ96T60 521 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 CYLDQ9NQC7 956 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 NAGPAQ9UK23 515 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 LSM7Q9UK45 103 aaKnown RBP16.1■□□□□ 0.17
CHD3-205ENST00000449744 MYO15AQ9UKN7 3530 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 OTOGLQ3ZCN5 2332 aa16.1■□□□□ 0.17
CHD3-205ENST00000449744 ATG2BQ96BY7 2078 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 A0A1W2PQH9 124 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 TBX18O95935 607 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 APODP05090 189 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 RETP07949 1114 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 CCDC192P0DO97 292 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 RALAP11233 206 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 RARGP13631 454 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 TBXAS1P24557 533 aaPredicted RBP16.09■□□□□ 0.17
CHD3-205ENST00000449744 SLC6A11P48066 632 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 FMO5P49326 533 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 GAB4Q2WGN9 574 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 ANO4Q32M45 955 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 C2orf27AQ580R0 203 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 BBS7Q8IWZ6 715 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 HHIPQ96QV1 700 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 KLF16Q9BXK1 252 aaPredicted RBP16.09■□□□□ 0.17
CHD3-205ENST00000449744 NMUR1Q9HB89 426 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 POLR3BQ9NW08 1133 aaPredicted RBP16.09■□□□□ 0.17
CHD3-205ENST00000449744 OSER1Q9NX31 292 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 CTNND2Q9UQB3 1225 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 MYO16Q9Y6X6 1858 aa16.09■□□□□ 0.17
CHD3-205ENST00000449744 PPP1R3GB7ZBB8 358 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 K7EQS6 105 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 AXIN1O15169 862 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 RPP40O75818 363 aaKnown RBP16.08■□□□□ 0.16
CHD3-205ENST00000449744 KAT7O95251 611 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 APBB3O95704 486 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 CD19P15391 556 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 PLA2G4AP47712 749 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 MORC3Q14149 939 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 PREPLQ4J6C6 727 aaPredicted RBP16.08■□□□□ 0.16
CHD3-205ENST00000449744 SGO2Q562F6 1265 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 C10orf120Q5SQS8 335 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 TTI2Q6NXR4 508 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 CCDC186Q7Z3E2 898 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 ANKRD52Q8NB46 1076 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 USP33Q8TEY7 942 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 GAB3Q8WWW8 586 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 NT5C1BQ96P26 610 aa16.08■□□□□ 0.16
CHD3-205ENST00000449744 CDK5RAP1Q96SZ6 601 aaKnown RBP16.08■□□□□ 0.16
CHD3-205ENST00000449744 DUSP9Q99956 384 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms