RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 STK3Q13188 491 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 DNAJC3Q13217 504 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 TMEM132DQ14C87 1099 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 C8orf34Q49A92 452 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 GRAMD4Q6IC98 578 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 SPATA2LQ8IUW3 424 aaPredicted RBP13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 SNRNP27Q8WVK2 155 aaKnown RBP13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 SCFD1Q8WVM8 642 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 TNFRSF25Q93038 417 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 BICD1Q96G01 975 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 CNDP2Q96KP4 475 aaKnown RBP13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 KIAA1024Q9UPX6 916 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 DERAQ9Y315 318 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 SNX14Q9Y5W7 946 aa13.45□□□□□ -0.26
AC004540.1-204ENST00000449537 NOTCH2Q04721 2471 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 KCNJ18B7U540 433 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 WASH3PC4AMC7 463 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 TERTO14746 1132 aaKnown RBP13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 OGTO15294 1046 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 CDKL5O76039 1030 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 GRIK1P39086 918 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 PPP3CCP48454 512 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 TPMTP51580 245 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 IL9RQ01113 521 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 ECM1Q16610 540 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 CFAP221Q4G0U5 840 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 INTS6LQ5JSJ4 861 aaKnown RBP13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 HAUS3Q68CZ6 603 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 ATG14Q6ZNE5 492 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 DHX40Q8IX18 779 aaKnown RBP13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 CACTIN-AS1Q8N1I8 211 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 TMEM161BQ8NDZ6 487 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 SNX19Q92543 992 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 ZNF578Q96N58 590 aaPredicted RBP13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 LARP6Q9BRS8 491 aaKnown RBP13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 SPHK2Q9NRA0 654 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 DDX43Q9NXZ2 648 aaKnown RBP13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 DPP3Q9NY33 737 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 TMEM131Q92545 1883 aa13.44□□□□□ -0.26
AC004540.1-204ENST00000449537 TCHHQ07283 1943 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 ENO4A6NNW6 628 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 CBX4O00257 560 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 KLK10O43240 276 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 PAPSS1O43252 624 aaPredicted RBP13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 UBR5O95071 2799 aaPredicted RBP13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 OLFM2O95897 454 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 MAPTP10636 758 aaKnown RBP13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 MBL2P11226 248 aaPredicted RBP13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 GLDCP23378 1020 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 ACAT1P24752 427 aaKnown RBP13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 MCM7P33993 719 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 MAGEA11P43364 429 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 GRIA4P48058 902 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 MYL7Q01449 175 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 MAPK7Q13164 816 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 TOB2Q14106 344 aaPredicted RBP13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 UBAP2LQ14157 1087 aaKnown RBP13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 STARD3Q14849 445 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 SV2CQ496J9 727 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 C4orf17Q53FE4 359 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 TMEM25Q86YD3 366 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 SIPA1Q96FS4 1042 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 FUBP3Q96I24 572 aaKnown RBP eCLIP13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 SPATA17Q96L03 361 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 PCED1AQ9H1Q7 454 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 OSGEPQ9NPF4 335 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 DNAJC17Q9NVM6 304 aaKnown RBP13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 EHD2Q9NZN4 543 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 CLCA2Q9UQC9 943 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 SLCO1B1Q9Y6L6 691 aa13.43□□□□□ -0.26
AC004540.1-204ENST00000449537 CREBBPQ92793 2442 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 PRRT4C9JH25 899 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 LAD1O00515 517 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 ACADVLP49748 655 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 LIG4P49917 911 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 USP46P62068 366 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 ORC1Q13415 861 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 FUT11Q495W5 492 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 C6orf132Q5T0Z8 1188 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 RINT1Q6NUQ1 792 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 DENND5BQ6ZUT9 1274 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 GATAD2AQ86YP4 633 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 TMPRSS6Q8IU80 811 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 PDCL2Q8N4E4 241 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 KCNE4Q8WWG9 221 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 TSC1Q92574 1164 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 HIC2Q96JB3 615 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 CEP295NLQ96MC4 621 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 XPO6Q96QU8 1125 aaKnown RBP13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 PKMYT1Q99640 499 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 DPH1Q9BZG8 443 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 MKRN2Q9H000 416 aaKnown RBP13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 ASB7Q9H672 318 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 TM9SF3Q9HD45 589 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 DDX19AQ9NUU7 478 aaKnown RBP13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 DNM3Q9UQ16 869 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 SH3BP1Q9Y3L3 701 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 STON1Q9Y6Q2 735 aa13.42□□□□□ -0.26
AC004540.1-204ENST00000449537 A0A1B0GTQ1 180 aa13.41□□□□□ -0.26
AC004540.1-204ENST00000449537 FAM189A1O60320 539 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms