RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 CASQ1P31415 396 aa20.19■□□□□ 0.82
RPS28-202ENST00000449223 IRS1P35568 1242 aa20.19■□□□□ 0.82
RPS28-202ENST00000449223 MATKP42679 507 aa20.19■□□□□ 0.82
RPS28-202ENST00000449223 CLCN4P51793 760 aa20.19■□□□□ 0.82
RPS28-202ENST00000449223 PAPD7Q5XG87 772 aaKnown RBP20.19■□□□□ 0.82
RPS28-202ENST00000449223 PEX26Q7Z412 305 aa20.19■□□□□ 0.82
RPS28-202ENST00000449223 EMC1Q8N766 993 aa20.19■□□□□ 0.82
RPS28-202ENST00000449223 HES6Q96HZ4 224 aa20.19■□□□□ 0.82
RPS28-202ENST00000449223 DDX23Q9BUQ8 820 aaKnown RBP20.19■□□□□ 0.82
RPS28-202ENST00000449223 GOLPH3Q9H4A6 298 aa20.19■□□□□ 0.82
RPS28-202ENST00000449223 EHD2Q9NZN4 543 aa20.19■□□□□ 0.82
RPS28-202ENST00000449223 INSL5Q9Y5Q6 135 aa20.19■□□□□ 0.82
RPS28-202ENST00000449223 MIF4GDA9UHW6 222 aaKnown RBP20.18■□□□□ 0.82
RPS28-202ENST00000449223 LPXNO60711 386 aa20.18■□□□□ 0.82
RPS28-202ENST00000449223 FTCDO95954 541 aa20.18■□□□□ 0.82
RPS28-202ENST00000449223 FYNP06241 537 aa20.18■□□□□ 0.82
RPS28-202ENST00000449223 PDGFRAP16234 1089 aa20.18■□□□□ 0.82
RPS28-202ENST00000449223 COMTP21964 271 aa20.18■□□□□ 0.82
RPS28-202ENST00000449223 ELF1P32519 619 aa20.18■□□□□ 0.82
RPS28-202ENST00000449223 NOS2P35228 1153 aa20.18■□□□□ 0.82
RPS28-202ENST00000449223 PLD1Q13393 1074 aa20.18■□□□□ 0.82
RPS28-202ENST00000449223 SDHAF4Q5VUM1 108 aa20.18■□□□□ 0.82
RPS28-202ENST00000449223 BNIPLQ7Z465 357 aa20.18■□□□□ 0.82
RPS28-202ENST00000449223 MON1AQ86VX9 555 aa20.18■□□□□ 0.82
RPS28-202ENST00000449223 RXFP2Q8WXD0 754 aa20.18■□□□□ 0.82
RPS28-202ENST00000449223 CENPIQ92674 756 aaPredicted RBP20.18■□□□□ 0.82
RPS28-202ENST00000449223 TIFAQ96CG3 184 aa20.18■□□□□ 0.82
RPS28-202ENST00000449223 TRMT2BQ96GJ1 504 aaKnown RBP20.18■□□□□ 0.82
RPS28-202ENST00000449223 MYRFLQ96LU7 910 aa20.18■□□□□ 0.82
RPS28-202ENST00000449223 RRAGDQ9NQL2 400 aaPredicted RBP20.18■□□□□ 0.82
RPS28-202ENST00000449223 AMFRQ9UKV5 643 aa20.18■□□□□ 0.82
RPS28-202ENST00000449223 CDH23Q9H251 3354 aa20.18■□□□□ 0.82
RPS28-202ENST00000449223 GRAP2O75791 330 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 GLUD1P00367 558 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 ATP1A1P05023 1023 aaKnown RBP20.17■□□□□ 0.82
RPS28-202ENST00000449223 CSH1P0DML2 217 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 CSH2P0DML3 217 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 PRLRP16471 622 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 PSMA2P25787 234 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 KLRC2P26717 231 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 YWHAQP27348 245 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 ALDH1A3P47895 512 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 USP46P62068 366 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 CHRDL2Q6WN34 429 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 CCDC149Q6ZUS6 474 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 ARHGAP18Q8N392 663 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 HDAC7Q8WUI4 952 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 OVCA2Q8WZ82 227 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 NDRG1Q92597 394 aaKnown RBP20.17■□□□□ 0.82
RPS28-202ENST00000449223 FAM149B1Q96BN6 582 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 NCAPGQ9BPX3 1015 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 RRN3Q9NYV6 651 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.17■□□□□ 0.82
RPS28-202ENST00000449223 ASB3Q9Y575 518 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 SLC38A8A6NNN8 435 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 PRRG1O14668 218 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 ZDHHC11BP0C7U3 371 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 CTNNA2P26232 953 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 SDC4P31431 198 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 CA8P35219 290 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 CTNNA1P35221 906 aaKnown RBP20.17■□□□□ 0.82
RPS28-202ENST00000449223 PCK1P35558 622 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 PSEN1P49768 467 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 AMPD2Q01433 879 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 LRIT3Q3SXY7 679 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 SLC25A52Q3SY17 297 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 CCDC14Q49A88 953 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 HFE2Q6ZVN8 426 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 MICAL1Q8TDZ2 1067 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 ARNTL2Q8WYA1 636 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 GOLGA1Q92805 767 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 PGAP3Q96FM1 320 aaPredicted RBP20.17■□□□□ 0.82
RPS28-202ENST00000449223 PLEKHA4Q9H4M7 779 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 ABCC13Q9NSE7 274 aa20.17■□□□□ 0.82
RPS28-202ENST00000449223 ENC1O14682 589 aa20.16■□□□□ 0.82
RPS28-202ENST00000449223 LRCH4O75427 683 aa20.16■□□□□ 0.82
RPS28-202ENST00000449223 ENDOD1O94919 500 aa20.16■□□□□ 0.82
RPS28-202ENST00000449223 HMGA1P17096 107 aaKnown RBP20.16■□□□□ 0.82
RPS28-202ENST00000449223 RNASE9P60153 205 aaKnown RBP20.16■□□□□ 0.82
RPS28-202ENST00000449223 LRRC38Q5VT99 294 aa20.16■□□□□ 0.82
RPS28-202ENST00000449223 SNX30Q5VWJ9 437 aa20.16■□□□□ 0.82
RPS28-202ENST00000449223 BSPRYQ5W0U4 402 aa20.16■□□□□ 0.82
RPS28-202ENST00000449223 SCD5Q86SK9 330 aa20.16■□□□□ 0.82
RPS28-202ENST00000449223 DEFB106AQ8N104 65 aa20.16■□□□□ 0.82
RPS28-202ENST00000449223 ARFGAP1Q8N6T3 406 aa20.16■□□□□ 0.82
RPS28-202ENST00000449223 KREMEN2Q8NCW0 462 aa20.16■□□□□ 0.82
RPS28-202ENST00000449223 PSMG2Q969U7 264 aa20.16■□□□□ 0.82
RPS28-202ENST00000449223 NPY6RQ99463 290 aa20.16■□□□□ 0.82
RPS28-202ENST00000449223 CLIC5Q9NZA1 410 aa20.16■□□□□ 0.82
RPS28-202ENST00000449223 STAP1Q9ULZ2 295 aa20.16■□□□□ 0.82
RPS28-202ENST00000449223 SNX12Q9UMY4 172 aa20.16■□□□□ 0.82
RPS28-202ENST00000449223 MYO7AQ13402 2215 aa20.16■□□□□ 0.82
RPS28-202ENST00000449223 CCDC66A2RUB6 948 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 EPOPA6NHQ4 379 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 PSTPIP1O43586 416 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 SPOPO43791 374 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 DESP17661 470 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 HOXA9P31269 272 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 YWHAGP61981 247 aaKnown RBP eCLIP20.15■□□□□ 0.82
RPS28-202ENST00000449223 MLLT1Q03111 559 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms