RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 SLC9A4Q6AI14 798 aa17.64■□□□□ 0.41
TOM1-210ENST00000449058 PMF1Q6P1K2 205 aa17.64■□□□□ 0.41
TOM1-210ENST00000449058 PLCD3Q8N3E9 789 aa17.64■□□□□ 0.41
TOM1-210ENST00000449058 FAF2Q96CS3 445 aa17.64■□□□□ 0.41
TOM1-210ENST00000449058 RAB3IPQ96QF0 476 aaPredicted RBP17.64■□□□□ 0.41
TOM1-210ENST00000449058 KLF6Q99612 283 aaPredicted RBP17.64■□□□□ 0.41
TOM1-210ENST00000449058 SLC4A5Q9BY07 1137 aa17.64■□□□□ 0.41
TOM1-210ENST00000449058 FRMD8Q9BZ67 464 aaPredicted RBP17.64■□□□□ 0.41
TOM1-210ENST00000449058 PCDH18Q9HCL0 1135 aa17.64■□□□□ 0.41
TOM1-210ENST00000449058 STK38LQ9Y2H1 464 aa17.64■□□□□ 0.41
TOM1-210ENST00000449058 CFAP69A5D8W1 941 aa17.63■□□□□ 0.41
TOM1-210ENST00000449058 C1QAP02745 245 aa17.63■□□□□ 0.41
TOM1-210ENST00000449058 T-ENOLP0DO92 83 aa17.63■□□□□ 0.41
TOM1-210ENST00000449058 GRM5P41594 1212 aa17.63■□□□□ 0.41
TOM1-210ENST00000449058 MAGEA6P43360 314 aa17.63■□□□□ 0.41
TOM1-210ENST00000449058 RGS7P49802 495 aa17.63■□□□□ 0.41
TOM1-210ENST00000449058 NEK3P51956 506 aa17.63■□□□□ 0.41
TOM1-210ENST00000449058 SLC18A2Q05940 514 aa17.63■□□□□ 0.41
TOM1-210ENST00000449058 SEPT7Q16181 437 aaKnown RBP17.63■□□□□ 0.41
TOM1-210ENST00000449058 SLC45A4Q5BKX6 768 aa17.63■□□□□ 0.41
TOM1-210ENST00000449058 PPP1R26Q5T8A7 1209 aaPredicted RBP17.63■□□□□ 0.41
TOM1-210ENST00000449058 TTC30AQ86WT1 665 aa17.63■□□□□ 0.41
TOM1-210ENST00000449058 INPP5DQ92835 1189 aa17.63■□□□□ 0.41
TOM1-210ENST00000449058 EMID1Q96A84 441 aaPredicted RBP17.63■□□□□ 0.41
TOM1-210ENST00000449058 OPTNQ96CV9 577 aa17.63■□□□□ 0.41
TOM1-210ENST00000449058 KIF12Q96FN5 646 aa17.63■□□□□ 0.41
TOM1-210ENST00000449058 TBCBQ99426 244 aa17.63■□□□□ 0.41
TOM1-210ENST00000449058 C16orf70Q9BSU1 422 aa17.63■□□□□ 0.41
TOM1-210ENST00000449058 C12orf65Q9H3J6 166 aaKnown RBP17.63■□□□□ 0.41
TOM1-210ENST00000449058 RAB6BQ9NRW1 208 aa17.63■□□□□ 0.41
TOM1-210ENST00000449058 RBM47A0AV96 593 aaKnown RBP17.62■□□□□ 0.41
TOM1-210ENST00000449058 BCLAF3A2AJT9 711 aaKnown RBP17.62■□□□□ 0.41
TOM1-210ENST00000449058 APOL1O14791 398 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 ZNF286BP0CG31 522 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 SETSIPP0DME0 302 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 CCND1P24385 295 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 ETV4P43268 484 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 YWHAZP63104 245 aaKnown RBP17.62■□□□□ 0.41
TOM1-210ENST00000449058 ATP11AP98196 1134 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 FYB2Q5VWT5 728 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 TMEM110Q86TL2 294 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 PCDH19Q8TAB3 1148 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 NLRP7Q8WX94 980 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 CDCA5Q96FF9 252 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 STAMBPL1Q96FJ0 436 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 SERAC1Q96JX3 654 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 TMEM237Q96Q45 408 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 GPATCH2LQ9NWQ4 482 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 PLXNB2O15031 1838 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 KCNN4O15554 427 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 AVILO75366 819 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 YWHAGP61981 247 aaKnown RBP eCLIP17.62■□□□□ 0.41
TOM1-210ENST00000449058 SLC6A3Q01959 620 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 FAAP100Q0VG06 881 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 PLEKHG4Q58EX7 1191 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 CHSY1Q86X52 802 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 FAM172AQ8WUF8 416 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 APOPT1Q96IL0 206 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 MANSC1Q9H8J5 431 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 VTA1Q9NP79 307 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 L3MBTL1Q9Y468 752 aa17.62■□□□□ 0.41
TOM1-210ENST00000449058 WDR91A4D1P6 747 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 ZNF487B1APH4 448 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 MDM4O15151 490 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 LPXNO60711 386 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 GABBR2O75899 941 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 FAM155BO75949 473 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 WFS1O76024 890 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 INHBAP08476 426 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 TARSP26639 723 aaKnown RBP17.61■□□□□ 0.41
TOM1-210ENST00000449058 RBL1P28749 1068 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 BCAR1P56945 870 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 R3HDM1Q15032 1099 aaKnown RBP17.61■□□□□ 0.41
TOM1-210ENST00000449058 ZNF792Q3KQV3 632 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 SYCP2LQ5T4T6 812 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 SCYL2Q6P3W7 929 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 TLDC1Q6P9B6 456 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 NLRP9Q7RTR0 991 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 SLC35F5Q8WV83 523 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 PTPRN2Q92932 1015 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 SLC7A6OSQ96CW6 309 aaPredicted RBP17.61■□□□□ 0.41
TOM1-210ENST00000449058 MRPL45Q9BRJ2 306 aaKnown RBP17.61■□□□□ 0.41
TOM1-210ENST00000449058 SNRNP25Q9BV90 132 aaKnown RBP17.61■□□□□ 0.41
TOM1-210ENST00000449058 NPHS2Q9NP85 383 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 NGRNQ9NPE2 291 aaKnown RBP17.61■□□□□ 0.41
TOM1-210ENST00000449058 KANSL3Q9P2N6 904 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 HAO1Q9UJM8 370 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 TTLL3Q9Y4R7 772 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 NME7Q9Y5B8 376 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 IKBKGQ9Y6K9 419 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 UTRNP46939 3433 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 TROVE2P10155 538 aaKnown RBP eCLIP17.61■□□□□ 0.412e-6■■■□□ 16.6
TOM1-210ENST00000449058 SDC4P31431 198 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 CA9Q16790 459 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 ACCSLQ4AC99 568 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 ACOT1Q86TX2 421 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 SESTD1Q86VW0 696 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 ZNF670Q9BS34 389 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 CXCL16Q9H2A7 254 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 POPDC2Q9HBU9 364 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms