RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 FBXO21O94952 628 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 SYF2O95926 243 aaKnown RBP11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 POMCP01189 267 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 ITGAVP06756 1048 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 KRT10P13645 584 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 LCP1P13796 627 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 SELPP16109 830 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 IL1R2P27930 398 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 HSD17B3P37058 310 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 EIF3BP55884 814 aaKnown RBP11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 SMTNL2Q2TAL5 461 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 CCDC14Q49A88 953 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 MDH1BQ5I0G3 518 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 TXNRD3NBQ6F5E7 133 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 ZDHHC24Q6UX98 284 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 PIGZQ86VD9 579 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 SIX6OS1Q8N1H7 587 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 THEM5Q8N1Q8 247 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 FBXO25Q8TCJ0 367 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 FAM172AQ8WUF8 416 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 UBLCP1Q8WVY7 318 aaPredicted RBP11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 KCNK17Q96T54 332 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 ACBD6Q9BR61 282 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 FOXP3Q9BZS1 431 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 NGRNQ9NPE2 291 aaKnown RBP11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 VPS18Q9P253 973 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 R3HDM2Q9Y2K5 976 aaKnown RBP11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 TRIM17Q9Y577 477 aa11.05□□□□□ -0.64
VIPAS39-203ENST00000448935 APOC4-APOC2K7ER74 178 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 M0QZQ0 153 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 HCRTO43612 131 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 CST8O60676 142 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 GRAP2O75791 330 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 ENDOD1O94919 500 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 KRT14P02533 472 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 APOC2P02655 101 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 TYMPP19971 482 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 ACAT1P24752 427 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 ADCY8P40145 1251 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 AFF1P51825 1210 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 PMS2P54278 862 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 VCPP55072 806 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 FAM189BP81408 668 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 KRT81Q14533 505 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 CDO1Q16878 200 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 C15orf59Q2T9L4 293 aaPredicted RBP11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 TIGD5Q53EQ6 642 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 KCNT1Q5JUK3 1230 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 TRAF7Q6Q0C0 670 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 LRRC8DQ7L1W4 858 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 STRADAQ7RTN6 431 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 RFX6Q8HWS3 928 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 MYCBPAPQ8TBZ2 947 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 RSPH1Q8WYR4 309 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 HSPH1Q92598 858 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 CFAP57Q96MR6 1250 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 DDX23Q9BUQ8 820 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 CALN1Q9BXU9 219 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 ELAC1Q9H777 363 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 PRDM16Q9HAZ2 1276 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 STAP1Q9ULZ2 295 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 PLAAQ9Y263 795 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 INPP5FQ9Y2H2 1132 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 FAN1Q9Y2M0 1017 aa11.04□□□□□ -0.64
VIPAS39-203ENST00000448935 TSC2P49815 1807 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 DAB1O75553 588 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 RARGP13631 454 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 TKTP29401 623 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 MATKP42679 507 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 CDK7P50613 346 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 CDH6P55285 790 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 ATP11AP98196 1134 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 GLIPR1L2Q4G1C9 344 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 TRNP1Q6NT89 227 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 SCYL2Q6P3W7 929 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 CLEC20AQ6ZU45 233 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 ANKS1BQ7Z6G8 1248 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 FAM35AQ86V20 835 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 PSTKQ8IV42 348 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 ALLCQ8N6M5 410 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 C3orf58Q8NDZ4 430 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 SLC35B2Q8TB61 432 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 CENPIQ92674 756 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 APBB2Q92870 758 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 SMARCD1Q96GM5 515 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 PIWIL1Q96J94 861 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 FAM193BQ96PV7 902 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 LPIN3Q9BQK8 851 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 B3GNT5Q9BYG0 378 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 TXLNGYQ9BZA5 131 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 OSBPL7Q9BZF2 842 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 PABPC3Q9H361 631 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 CNGB3Q9NQW8 809 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 TMEM161AQ9NX61 479 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 ANAPC5Q9UJX4 755 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 DNPEPQ9ULA0 475 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 ATP8A1Q9Y2Q0 1164 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms