RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 COPS2P61201 443 aa15.44■□□□□ 0.06
SF1-211ENST00000448404 LMNB2Q03252 620 aa15.44■□□□□ 0.06
SF1-211ENST00000448404 STAT4Q14765 748 aa15.44■□□□□ 0.06
SF1-211ENST00000448404 SLC27A1Q6PCB7 646 aa15.44■□□□□ 0.06
SF1-211ENST00000448404 DRICH1Q6PGQ1 229 aaPredicted RBP15.44■□□□□ 0.06
SF1-211ENST00000448404 IFNLR1Q8IU57 520 aaPredicted RBP15.44■□□□□ 0.06
SF1-211ENST00000448404 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.44■□□□□ 0.06
SF1-211ENST00000448404 CYP3A43Q9HB55 503 aa15.44■□□□□ 0.06
SF1-211ENST00000448404 RRAGCQ9HB90 399 aa15.44■□□□□ 0.06
SF1-211ENST00000448404 SLC40A1Q9NP59 571 aa15.44■□□□□ 0.06
SF1-211ENST00000448404 SLC17A6Q9P2U8 582 aa15.44■□□□□ 0.06
SF1-211ENST00000448404 RBM47A0AV96 593 aaKnown RBP15.43■□□□□ 0.06
SF1-211ENST00000448404 I3L4J1 428 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 APOC4-APOC2K7ER74 178 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 APOC2P02655 101 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 ATICP31939 592 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 CRADDP78560 199 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 ROR1Q01973 937 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 OLIG2Q13516 323 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 UNC5BQ8IZJ1 945 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 BBOF1Q8ND07 529 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 SLC35F5Q8WV83 523 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 CKAP2Q8WWK9 683 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 FAM149B1Q96BN6 582 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 GCOM2Q9BZD3 368 aaPredicted RBP15.43■□□□□ 0.06
SF1-211ENST00000448404 STMN4Q9H169 189 aaPredicted RBP15.43■□□□□ 0.06
SF1-211ENST00000448404 PCDH18Q9HCL0 1135 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 SLC17A7Q9P2U7 560 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 BPTFQ12830 3046 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 KBTBD13C9JR72 458 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 AMHP03971 560 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 APRTP07741 180 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 TAC1P20366 129 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 SDC4P31431 198 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 YWHAGP61981 247 aaKnown RBP eCLIP15.43■□□□□ 0.06
SF1-211ENST00000448404 SPRYD7Q5W111 196 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 OSTM1Q86WC4 334 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 PALM2Q8IXS6 379 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 PPIL6Q8IXY8 311 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 FNIP1Q8TF40 1166 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 FAF2Q96CS3 445 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 RNF157Q96PX1 679 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 PAFAH2Q99487 392 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 RHOBTB2Q9BYZ6 727 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 NKIRAS1Q9NYS0 192 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 IL1RAPL1Q9NZN1 696 aa15.43■□□□□ 0.06
SF1-211ENST00000448404 TOP3BO95985 862 aaKnown RBP15.42■□□□□ 0.06
SF1-211ENST00000448404 DARSP14868 501 aaKnown RBP15.42■□□□□ 0.06
SF1-211ENST00000448404 ADRA1DP25100 572 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 OVGP1Q12889 678 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 MFSD10Q14728 455 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 SNX17Q15036 470 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 TBC1D1Q86TI0 1168 aaPredicted RBP15.42■□□□□ 0.06
SF1-211ENST00000448404 CNPY4Q8N129 248 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 MPP5Q8N3R9 675 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 WNT8BQ93098 351 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 CCDC77Q9BR77 488 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 PAAF1Q9BRP4 392 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.42■□□□□ 0.06
SF1-211ENST00000448404 MAGED2Q9UNF1 606 aaPredicted RBP15.42■□□□□ 0.06
SF1-211ENST00000448404 STRNO43815 780 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 FSBPO95073 299 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 AMPD1P23109 780 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 BCAR1P56945 870 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 TAZQ16635 292 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 KBTBD12Q3ZCT8 623 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 PKDCCQ504Y2 493 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 HFE2Q6ZVN8 426 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 ANKLE1Q8NAG6 615 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 VRTNQ9H8Y1 702 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 USP29Q9HBJ7 922 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 WDR35Q9P2L0 1181 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 LGALS13Q9UHV8 139 aa15.42■□□□□ 0.06
SF1-211ENST00000448404 FAM47DPA6NHR8 397 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 CXorf49A8MYA2 514 aaPredicted RBP15.41■□□□□ 0.06
SF1-211ENST00000448404 GNL1P36915 607 aaPredicted RBP15.41■□□□□ 0.06
SF1-211ENST00000448404 GMPRP36959 345 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 SLC6A3Q01959 620 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 ZBTB6Q15916 424 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 BSPRYQ5W0U4 402 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 CST9Q5W186 159 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 TRPM8Q7Z2W7 1104 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 FITM2Q8N6M3 262 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 CCDC63Q8NA47 563 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 RNF169Q8NCN4 708 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 TBCBQ99426 244 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 HESX1Q9UBX0 185 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 SHOC2Q9UQ13 582 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 METTL18O95568 372 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 GOT1P17174 413 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 PTPN7P35236 360 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 KCNJ2P63252 427 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 NOMO1Q15155 1222 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 FBXO47Q5MNV8 452 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 KIAA0319Q5VV43 1072 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 TWF2Q6IBS0 349 aaKnown RBP15.41■□□□□ 0.06
SF1-211ENST00000448404 PPP1R2P3Q6NXS1 205 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 NOTUMQ6P988 496 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 GIMAP7Q8NHV1 300 aa15.41■□□□□ 0.06
SF1-211ENST00000448404 EMID1Q96A84 441 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms