RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 MFAP3P55082 362 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 RUNX3Q13761 415 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 NCAPHQ15003 741 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 PKDCCQ504Y2 493 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 RAB41Q5JT25 222 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 DPY19L2P1Q6NXN4 242 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 LCLAT1Q6UWP7 414 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 ZNF852Q6ZMS4 543 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 CCDC186Q7Z3E2 898 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 OSCP1Q8WVF1 389 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 FAM3CQ92520 227 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 SECISBP2LQ93073 1101 aaKnown RBP15.62■□□□□ 0.09
HDAC4-204ENST00000446876 WBP2Q969T9 261 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 LSM14BQ9BX40 385 aaKnown RBP15.62■□□□□ 0.09
HDAC4-204ENST00000446876 ULBP1Q9BZM6 244 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 NACA2Q9H009 215 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 LINC00597Q9H2U6 94 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 DLGAP2Q9P1A6 1054 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 NAGPAQ9UK23 515 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 DNAJC12Q9UKB3 198 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 KIAA1257Q9ULG3 409 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 MYOFQ9NZM1 2061 aa15.62■□□□□ 0.09
HDAC4-204ENST00000446876 IRF1P10914 325 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 RARGP13631 454 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 TCF3P15923 654 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 CTHP32929 405 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 KLK7P49862 253 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 TUBP50607 506 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 SLC8A3P57103 927 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 ADIGQ0VDE8 80 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 TCF15Q12870 199 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 CNGA2Q16280 664 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 KLHL40Q2TBA0 621 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 EML3Q32P44 896 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 ITPRIPL2Q3MIP1 535 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 NAIF1Q69YI7 327 aaPredicted RBP15.61■□□□□ 0.09
HDAC4-204ENST00000446876 DENND1BQ6P3S1 775 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 ENOSF1Q7L5Y1 443 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 DTWD2Q8NBA8 298 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 CHFRQ96EP1 664 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 UBXN6Q9BZV1 441 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 HSD3B7Q9H2F3 369 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.61■□□□□ 0.09
HDAC4-204ENST00000446876 FHOD1Q9Y613 1164 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 WDFY4Q6ZS81 3184 aa15.61■□□□□ 0.09
HDAC4-204ENST00000446876 SYCE3A1L190 88 aa15.6■□□□□ 0.09
HDAC4-204ENST00000446876 MAN2B1O00754 1011 aa15.6■□□□□ 0.09
HDAC4-204ENST00000446876 THAP12O43422 761 aa15.6■□□□□ 0.09
HDAC4-204ENST00000446876 GALR2O43603 387 aaPredicted RBP15.6■□□□□ 0.09
HDAC4-204ENST00000446876 GABBR2O75899 941 aa15.6■□□□□ 0.09
HDAC4-204ENST00000446876 LETM1O95202 739 aaPredicted RBP15.6■□□□□ 0.09
HDAC4-204ENST00000446876 SETSIPP0DME0 302 aa15.6■□□□□ 0.09
HDAC4-204ENST00000446876 LCP1P13796 627 aa15.6■□□□□ 0.09
HDAC4-204ENST00000446876 GNA15P30679 374 aa15.6■□□□□ 0.09
HDAC4-204ENST00000446876 PLA2G4AP47712 749 aa15.6■□□□□ 0.09
HDAC4-204ENST00000446876 PON2Q15165 354 aa15.6■□□□□ 0.09
HDAC4-204ENST00000446876 PDGFRLQ15198 375 aa15.6■□□□□ 0.09
HDAC4-204ENST00000446876 PMF1Q6P1K2 205 aa15.6■□□□□ 0.09
HDAC4-204ENST00000446876 BHLHA9Q7RTU4 235 aa15.6■□□□□ 0.09
HDAC4-204ENST00000446876 ZNF687Q8N1G0 1237 aa15.6■□□□□ 0.09
HDAC4-204ENST00000446876 SHC3Q92529 594 aa15.6■□□□□ 0.09
HDAC4-204ENST00000446876 C8orf33Q9H7E9 229 aaPredicted RBP15.6■□□□□ 0.09
HDAC4-204ENST00000446876 LRRC4Q9HBW1 653 aa15.6■□□□□ 0.09
HDAC4-204ENST00000446876 CYLDQ9NQC7 956 aa15.6■□□□□ 0.09
HDAC4-204ENST00000446876 ZBED1O96006 694 aa15.59■□□□□ 0.09
HDAC4-204ENST00000446876 COPB1P53618 953 aaKnown RBP15.59■□□□□ 0.09
HDAC4-204ENST00000446876 FZD5Q13467 585 aa15.59■□□□□ 0.09
HDAC4-204ENST00000446876 RAPGEF1Q13905 1077 aa15.59■□□□□ 0.09
HDAC4-204ENST00000446876 STILQ15468 1287 aa15.59■□□□□ 0.09
HDAC4-204ENST00000446876 C10orf120Q5SQS8 335 aa15.59■□□□□ 0.09
HDAC4-204ENST00000446876 RALGPS2Q86X27 583 aaPredicted RBP15.59■□□□□ 0.09
HDAC4-204ENST00000446876 CPA6Q8N4T0 437 aa15.59■□□□□ 0.09
HDAC4-204ENST00000446876 SLC35F5Q8WV83 523 aa15.59■□□□□ 0.09
HDAC4-204ENST00000446876 FAM81BQ96LP2 452 aa15.59■□□□□ 0.09
HDAC4-204ENST00000446876 FUCA2Q9BTY2 467 aa15.59■□□□□ 0.09
HDAC4-204ENST00000446876 KLF16Q9BXK1 252 aaPredicted RBP15.59■□□□□ 0.09
HDAC4-204ENST00000446876 ECT2Q9H8V3 914 aa15.59■□□□□ 0.09
HDAC4-204ENST00000446876 RBM12Q9NTZ6 932 aaKnown RBP15.59■□□□□ 0.09
HDAC4-204ENST00000446876 MRPS17Q9Y2R5 130 aaKnown RBP15.59■□□□□ 0.09
HDAC4-204ENST00000446876 ATG2BQ96BY7 2078 aa15.58■□□□□ 0.09
HDAC4-204ENST00000446876 H0Y858 1186 aa15.58■□□□□ 0.08
HDAC4-204ENST00000446876 FOXN3O00409 490 aaPredicted RBP15.58■□□□□ 0.08
HDAC4-204ENST00000446876 ATP1A3P13637 1013 aa15.58■□□□□ 0.08
HDAC4-204ENST00000446876 ZNF18P17022 549 aa15.58■□□□□ 0.08
HDAC4-204ENST00000446876 GJA4P35212 333 aa15.58■□□□□ 0.08
HDAC4-204ENST00000446876 ATP5C1P36542 298 aaKnown RBP15.58■□□□□ 0.08
HDAC4-204ENST00000446876 YWHAGP61981 247 aaKnown RBP eCLIP15.58■□□□□ 0.08
HDAC4-204ENST00000446876 KLHDC7AQ5VTJ3 777 aa15.58■□□□□ 0.08
HDAC4-204ENST00000446876 DDX42Q86XP3 938 aaKnown RBP eCLIP15.58■□□□□ 0.08
HDAC4-204ENST00000446876 MIB1Q86YT6 1006 aa15.58■□□□□ 0.08
HDAC4-204ENST00000446876 DHX40Q8IX18 779 aaKnown RBP15.58■□□□□ 0.08
HDAC4-204ENST00000446876 SIX6OS1Q8N1H7 587 aa15.58■□□□□ 0.08
HDAC4-204ENST00000446876 CLEC4CQ8WTT0 213 aa15.58■□□□□ 0.08
HDAC4-204ENST00000446876 ZNF606Q8WXB4 792 aa15.58■□□□□ 0.08
HDAC4-204ENST00000446876 KCTD13Q8WZ19 329 aa15.58■□□□□ 0.08
HDAC4-204ENST00000446876 ATP2A3Q93084 1043 aa15.58■□□□□ 0.08
HDAC4-204ENST00000446876 OSBPL6Q9BZF3 934 aa15.58■□□□□ 0.08
HDAC4-204ENST00000446876 FAM86C1Q9NVL1 165 aa15.58■□□□□ 0.08
HDAC4-204ENST00000446876 LIMA1Q9UHB6 759 aaKnown RBP15.58■□□□□ 0.08
HDAC4-204ENST00000446876 CYTH4Q9UIA0 394 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms