RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 GCNT1Q02742 428 aa18.43■□□□□ 0.54
ATG9A-215ENST00000446716 CCNI2Q6ZMN8 369 aaPredicted RBP18.43■□□□□ 0.54
ATG9A-215ENST00000446716 TFAP2DQ7Z6R9 452 aa18.43■□□□□ 0.54
ATG9A-215ENST00000446716 PALB2Q86YC2 1186 aa18.43■□□□□ 0.54
ATG9A-215ENST00000446716 ATP13A1Q9HD20 1204 aa18.43■□□□□ 0.54
ATG9A-215ENST00000446716 RIC8BQ9NVN3 520 aa18.43■□□□□ 0.54
ATG9A-215ENST00000446716 UBIAD1Q9Y5Z9 338 aa18.43■□□□□ 0.54
ATG9A-215ENST00000446716 FRMD3A2A2Y4 597 aa18.43■□□□□ 0.54
ATG9A-215ENST00000446716 H2AFYO75367 372 aaKnown RBP18.43■□□□□ 0.54
ATG9A-215ENST00000446716 NFIL3Q16649 462 aa18.43■□□□□ 0.54
ATG9A-215ENST00000446716 MARC1Q5VT66 337 aa18.43■□□□□ 0.54
ATG9A-215ENST00000446716 KIAA0319LQ8IZA0 1049 aa18.43■□□□□ 0.54
ATG9A-215ENST00000446716 TRIML2Q8N7C3 387 aa18.43■□□□□ 0.54
ATG9A-215ENST00000446716 PACSIN1Q9BY11 444 aa18.43■□□□□ 0.54
ATG9A-215ENST00000446716 EFL1Q7Z2Z2 1120 aaKnown RBP18.42■□□□□ 0.54
ATG9A-215ENST00000446716 ZDHHC17Q8IUH5 632 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 CSGALNACT1Q8TDX6 532 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 RBM22Q9NW64 420 aaKnown RBP eCLIP18.42■□□□□ 0.549e-7■■□□□ 14.2
ATG9A-215ENST00000446716 SDR42E2A6NKP2 422 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 BDNFP23560 247 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 SPOCD1Q6ZMY3 1216 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 ZNF571Q7Z3V5 609 aaPredicted RBP18.42■□□□□ 0.54
ATG9A-215ENST00000446716 FICDQ9BVA6 458 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 TMEM134Q9H6X4 195 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.42■□□□□ 0.54
ATG9A-215ENST00000446716 NCAM2O15394 837 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 OCM2P0CE71 109 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 OCMP0CE72 109 aaPredicted RBP18.42■□□□□ 0.54
ATG9A-215ENST00000446716 LRIG3Q6UXM1 1119 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 FTHL17Q9BXU8 183 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 STX18Q9P2W9 335 aaKnown RBP18.42■□□□□ 0.54
ATG9A-215ENST00000446716 SPASTQ9UBP0 616 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 PIK3CDO00329 1044 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 OR1E1P30953 314 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 ATP6V1E1P36543 226 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 PRUNE1Q86TP1 453 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 VPS37AQ8NEZ2 397 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 NEUROG2Q9H2A3 272 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 OSGEPL1Q9H4B0 414 aa18.42■□□□□ 0.54
ATG9A-215ENST00000446716 TRIM49D1C9J1S8 452 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 CAPN15O75808 1086 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 PRKCQQ04759 706 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 EIF2B5Q13144 721 aaKnown RBP18.41■□□□□ 0.54
ATG9A-215ENST00000446716 ZNF268Q14587 947 aaPredicted RBP18.41■□□□□ 0.54
ATG9A-215ENST00000446716 PABPC1LQ4VXU2 614 aaKnown RBP18.41■□□□□ 0.54
ATG9A-215ENST00000446716 TREML2Q5T2D2 321 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 LRRC6Q86X45 466 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 NAF1Q96HR8 494 aaKnown RBP18.41■□□□□ 0.54
ATG9A-215ENST00000446716 CELF6Q96J87 481 aaKnown RBP18.41■□□□□ 0.54
ATG9A-215ENST00000446716 PRMT1Q99873 361 aaKnown RBP18.41■□□□□ 0.54
ATG9A-215ENST00000446716 LRRC40Q9H9A6 602 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 ARHGEF28Q8N1W1 1705 aaKnown RBP18.41■□□□□ 0.54
ATG9A-215ENST00000446716 SMIM22K7EJ46 135 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 MEIS2O14770 477 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 PSMD10O75832 226 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 SERPINF2P08697 491 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 PAEPP09466 180 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 PBLDP30039 288 aaPredicted RBP18.41■□□□□ 0.54
ATG9A-215ENST00000446716 CTNNB1P35222 781 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 RAP1GDS1P52306 607 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 HDAC4P56524 1084 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 DDX39BQ13838 428 aaKnown RBP18.41■□□□□ 0.54
ATG9A-215ENST00000446716 PREPLQ4J6C6 727 aaPredicted RBP18.41■□□□□ 0.54
ATG9A-215ENST00000446716 ILDR2Q71H61 639 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 SPATA21Q7Z572 469 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 EXD1Q8NHP7 514 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 TMA16Q96EY4 203 aaKnown RBP18.41■□□□□ 0.54
ATG9A-215ENST00000446716 PNKPQ96T60 521 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 NAT9Q9BTE0 207 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 RNF19AQ9NV58 838 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 SCOCQ9UIL1 159 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 SYCE1LA8MT33 242 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 IL10P22301 178 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 CYP2F1P24903 491 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 MAPK7Q13164 816 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 DGKZQ13574 1117 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 AGAP9Q5VTM2 703 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 FIBCD1Q8N539 461 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 NR1H4Q96RI1 486 aaPredicted RBP18.41■□□□□ 0.54
ATG9A-215ENST00000446716 PRPF18Q99633 342 aaKnown RBP18.41■□□□□ 0.54
ATG9A-215ENST00000446716 ROPN1BQ9BZX4 212 aaPredicted RBP18.41■□□□□ 0.54
ATG9A-215ENST00000446716 ISCUQ9H1K1 167 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 ROPN1Q9HAT0 212 aaPredicted RBP18.41■□□□□ 0.54
ATG9A-215ENST00000446716 BLOC1S4Q9NUP1 217 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 FAM32AQ9Y421 112 aaKnown RBP18.41■□□□□ 0.54
ATG9A-215ENST00000446716 MICAL2O94851 1124 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 GUCY1A3Q02108 690 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 KDSRQ06136 332 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 FAM110CQ1W6H9 321 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 ERMARDQ5T6L9 678 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 CCDC149Q6ZUS6 474 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 KAT2BQ92831 832 aa18.41■□□□□ 0.54
ATG9A-215ENST00000446716 CCDC85CA6NKD9 419 aa18.4■□□□□ 0.54
ATG9A-215ENST00000446716 SPTLC1O15269 473 aa18.4■□□□□ 0.54
ATG9A-215ENST00000446716 GLRA2P23416 452 aa18.4■□□□□ 0.54
ATG9A-215ENST00000446716 TUBP50607 506 aa18.4■□□□□ 0.54
ATG9A-215ENST00000446716 NUP93Q8N1F7 819 aa18.4■□□□□ 0.54
ATG9A-215ENST00000446716 NLGN2Q8NFZ4 835 aa18.4■□□□□ 0.54
ATG9A-215ENST00000446716 OR2W6PQ8NHA6 318 aa18.4■□□□□ 0.54
ATG9A-215ENST00000446716 ELMO3Q96BJ8 720 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms