RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 AP1B1Q10567 949 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 NBPF12Q5TAG4 269 aaPredicted RBP14.79□□□□□ -0.04
ERCC3-203ENST00000445889 CWF19L1Q69YN2 538 aaKnown RBP14.79□□□□□ -0.04
ERCC3-203ENST00000445889 SAMD7Q7Z3H4 446 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 POLNQ7Z5Q5 900 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 NUDCD3Q8IVD9 361 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 UBR7Q8N806 425 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 GSTCDQ8NEC7 633 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 PYDC1Q8WXC3 89 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 ALKBH8Q96BT7 664 aaKnown RBP14.79□□□□□ -0.04
ERCC3-203ENST00000445889 CCDC124Q96CT7 223 aaKnown RBP14.79□□□□□ -0.04
ERCC3-203ENST00000445889 ZNF184Q99676 751 aaPredicted RBP14.79□□□□□ -0.04
ERCC3-203ENST00000445889 SDCBP2Q9H190 292 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 DHX33Q9H6R0 707 aaKnown RBP14.79□□□□□ -0.04
ERCC3-203ENST00000445889 CPSF2Q9P2I0 782 aaKnown RBP14.79□□□□□ -0.04
ERCC3-203ENST00000445889 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.79□□□□□ -0.04
ERCC3-203ENST00000445889 TOM1L1O75674 476 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 LDHAP00338 332 aaKnown RBP14.79□□□□□ -0.04
ERCC3-203ENST00000445889 CSH1P0DML2 217 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 CSH2P0DML3 217 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 EIF4BP23588 611 aaKnown RBP14.79□□□□□ -0.04
ERCC3-203ENST00000445889 ARL2P36404 184 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 PPP6R3Q5H9R7 873 aaPredicted RBP14.79□□□□□ -0.04
ERCC3-203ENST00000445889 SPDYAQ5MJ70 313 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 TRNP1Q6NT89 227 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 XYLT1Q86Y38 959 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 NDUFAF2Q8N183 169 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 SMC1BQ8NDV3 1235 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 E2F7Q96AV8 911 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 FGD4Q96M96 766 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 PPCSQ9HAB8 311 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 PLAC1Q9HBJ0 212 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 CNTN3Q9P232 1028 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 SLC7A8Q9UHI5 535 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 RPL26L1Q9UNX3 145 aaKnown RBP14.79□□□□□ -0.04
ERCC3-203ENST00000445889 ARHGAP42A6NI28 874 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 I3L4J1 428 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 RNF8O76064 485 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 RAB27AP51159 221 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 EPHB1P54762 984 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 CXCL9Q07325 125 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 C1orf146Q5VVC0 180 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 RSPH3Q86UC2 560 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 BRSK2Q8IWQ3 736 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.79□□□□□ -0.04
ERCC3-203ENST00000445889 NLRP4Q96MN2 994 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 TUBB6Q9BUF5 446 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 TRIM4Q9C037 500 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 PHACTR1Q9C0D0 580 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 CYP4F11Q9HBI6 524 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 ACSS2Q9NR19 701 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 RNF19AQ9NV58 838 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 WDR35Q9P2L0 1181 aa14.79□□□□□ -0.04
ERCC3-203ENST00000445889 APOC4-APOC2K7ER74 178 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 ZMPSTE24O75844 475 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 ATG7O95352 703 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 APOC2P02655 101 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 HMGCRP04035 888 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 C6orf222P0C671 652 aaPredicted RBP14.78□□□□□ -0.04
ERCC3-203ENST00000445889 RTP1P59025 263 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 YWHAZP63104 245 aaKnown RBP14.78□□□□□ -0.04
ERCC3-203ENST00000445889 CMPK2Q5EBM0 449 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 RALGPS1Q5JS13 557 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 BSPRYQ5W0U4 402 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 SCUBE1Q8IWY4 988 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 XYLT2Q9H1B5 865 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 CEP350Q5VT06 3117 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 DNAH12Q6ZR08 3092 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 LOC100653049A0A140TA62 436 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 M0QYV0 167 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 ITM2AO43736 263 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 KRT34O76011 436 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 PDE5AO76074 875 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 CXCL8P10145 99 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 ETS2P15036 469 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 KCNA4P22459 653 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 SLC18A2Q05940 514 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 EEF1DP3Q658K8 133 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 SLC26A11Q86WA9 606 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 ULK2Q8IYT8 1036 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 GALNT15Q8N3T1 639 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 C12orf29Q8N999 325 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 RDM1Q8NG50 284 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 ADPGKQ9BRR6 497 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 NGRNQ9NPE2 291 aaKnown RBP14.78□□□□□ -0.04
ERCC3-203ENST00000445889 ZNF214Q9UL59 606 aaPredicted RBP14.78□□□□□ -0.04
ERCC3-203ENST00000445889 PLLPQ9Y342 182 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 TTLL3Q9Y4R7 772 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 AFG3L2Q9Y4W6 797 aa14.78□□□□□ -0.04
ERCC3-203ENST00000445889 INO80B-WBP1J3KQ70 363 aa14.77□□□□□ -0.04
ERCC3-203ENST00000445889 ADCY3O60266 1144 aa14.77□□□□□ -0.04
ERCC3-203ENST00000445889 DNAJC6O75061 913 aa14.77□□□□□ -0.04
ERCC3-203ENST00000445889 STK10O94804 968 aaKnown RBP14.77□□□□□ -0.04
ERCC3-203ENST00000445889 LSM8O95777 96 aaKnown RBP14.77□□□□□ -0.04
ERCC3-203ENST00000445889 TRUB2O95900 331 aaKnown RBP14.77□□□□□ -0.04
ERCC3-203ENST00000445889 ROR2Q01974 943 aaKnown RBP14.77□□□□□ -0.04
ERCC3-203ENST00000445889 ZRSR2Q15696 482 aaKnown RBP14.77□□□□□ -0.04
ERCC3-203ENST00000445889 CA9Q16790 459 aa14.77□□□□□ -0.04
ERCC3-203ENST00000445889 VWA5B1Q5TIE3 1220 aa14.77□□□□□ -0.04
ERCC3-203ENST00000445889 TTC13Q8NBP0 860 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms