RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 GMIPQ9P107 970 aa13.83□□□□□ -0.2
TIMP1-204ENST00000445623 EPN1Q9Y6I3 576 aaPredicted RBP13.83□□□□□ -0.2
TIMP1-204ENST00000445623 CLUHO75153 1309 aa13.83□□□□□ -0.2
TIMP1-204ENST00000445623 ANKRD62A6NC57 917 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 NDUFA10O95299 355 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 ABL1P00519 1130 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 LTFP02788 710 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 F11P03951 625 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 GLI1P08151 1106 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 H2AFZP0C0S5 128 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 RALAP11233 206 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 DDX6P26196 483 aaKnown RBP eCLIP13.82□□□□□ -0.2
TIMP1-204ENST00000445623 YWHAGP61981 247 aaKnown RBP eCLIP13.82□□□□□ -0.2
TIMP1-204ENST00000445623 KRT83P78385 493 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 SLC6A3Q01959 620 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 SMAD4Q13485 552 aaKnown RBP13.82□□□□□ -0.2
TIMP1-204ENST00000445623 FAM102AQ5T9C2 384 aaPredicted RBP13.82□□□□□ -0.2
TIMP1-204ENST00000445623 BTBD8Q5XKL5 378 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 DNAJC24Q6P3W2 148 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 OLFML1Q6UWY5 402 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 H2AFVQ71UI9 128 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 XYLT1Q86Y38 959 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 C3orf20Q8ND61 904 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 CTNNBL1Q8WYA6 563 aaPredicted RBP13.82□□□□□ -0.2
TIMP1-204ENST00000445623 ZNF653Q96CK0 615 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 SELENOOQ9BVL4 669 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 LRRC3Q9BY71 257 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 WDR6Q9NNW5 1121 aaKnown RBP13.82□□□□□ -0.2
TIMP1-204ENST00000445623 ASNSD1Q9NWL6 643 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 CLIC5Q9NZA1 410 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 INTUQ9ULD6 942 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 NENFQ9UMX5 172 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 FAM50BQ9Y247 325 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 MRPS23Q9Y3D9 190 aaKnown RBP13.82□□□□□ -0.2
TIMP1-204ENST00000445623 SCINQ9Y6U3 715 aa13.82□□□□□ -0.2
TIMP1-204ENST00000445623 OBSL1O75147 1896 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 A0A1W2PRU2 124 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 FAM170AA1A519 330 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 ZNF840PA6NDX5 716 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 SOBPA7XYQ1 873 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 GOLGA8SH3BPF8 625 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 H3BQ06 376 aaPredicted RBP13.81□□□□□ -0.2
TIMP1-204ENST00000445623 CAPN9O14815 690 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 HSF2BPO75031 334 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 GABBR2O75899 941 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 LCA5LO95447 670 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 ZDHHC11BP0C7U3 371 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 DESP17661 470 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 PFKLP17858 780 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 ABCB4P21439 1286 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 FSHRP23945 695 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 TUBP50607 506 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 GPC5P78333 572 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 PTP4A2Q12974 167 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 CLUL1Q15846 466 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 PUS10Q3MIT2 529 aaKnown RBP13.81□□□□□ -0.2
TIMP1-204ENST00000445623 PRSS36Q5K4E3 855 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 SNX30Q5VWJ9 437 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 RAD9BQ6WBX8 426 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 SLC26A9Q7LBE3 791 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 CLEC4CQ8WTT0 213 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 MCRS1Q96EZ8 462 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 IL21Q9HBE4 155 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 POPDC2Q9HBU9 364 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 MRPL47Q9HD33 250 aaKnown RBP13.81□□□□□ -0.2
TIMP1-204ENST00000445623 ABCC13Q9NSE7 274 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 OLA1Q9NTK5 396 aaKnown RBP13.81□□□□□ -0.2
TIMP1-204ENST00000445623 PARVAQ9NVD7 372 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 TJP2Q9UDY2 1190 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 CNOT8Q9UFF9 292 aaKnown RBP13.81□□□□□ -0.2
TIMP1-204ENST00000445623 CHORDC1Q9UHD1 332 aaPredicted RBP13.81□□□□□ -0.2
TIMP1-204ENST00000445623 DENND4CQ5VZ89 1909 aa13.81□□□□□ -0.2
TIMP1-204ENST00000445623 A0A1W2PQH9 124 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 YJEFN3A6XGL0 299 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 E7ENQ6 273 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 TMEM253P0C7T8 217 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 MAGEA1P43355 309 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 GALCP54803 685 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 YWHAZP63104 245 aaKnown RBP13.8□□□□□ -0.2
TIMP1-204ENST00000445623 NTHL1P78549 312 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 CCZ1BP86790 482 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 CCZ1P86791 482 aaPredicted RBP13.8□□□□□ -0.2
TIMP1-204ENST00000445623 LEXMQ3ZCV2 418 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 C2CD6Q53TS8 623 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 HECTD3Q5T447 861 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 BSPRYQ5W0U4 402 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 GAREM2Q75VX8 874 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 RSRC2Q7L4I2 434 aaKnown RBP13.8□□□□□ -0.2
TIMP1-204ENST00000445623 BEND5Q7L4P6 421 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 ZNF276Q8N554 614 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 SHKBP1Q8TBC3 707 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 RNF139Q8WU17 664 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 NACA2Q9H009 215 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 SLITRK6Q9H5Y7 841 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 USP15Q9Y4E8 981 aaPredicted RBP13.8□□□□□ -0.2
TIMP1-204ENST00000445623 PCDHA13Q9Y5I0 950 aa13.8□□□□□ -0.2
TIMP1-204ENST00000445623 BRWD1Q9NSI6 2320 aa13.79□□□□□ -0.2
TIMP1-204ENST00000445623 DENND4AQ7Z401 1863 aa13.79□□□□□ -0.2
TIMP1-204ENST00000445623 TRAV19A0A0A6YYK7 116 aa13.79□□□□□ -0.2
TIMP1-204ENST00000445623 TLR5O60602 858 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms