RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 CTXN3Q4LDR2 81 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 CENPPQ6IPU0 288 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 NAGSQ8N159 534 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 CHMP4CQ96CF2 233 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 SLC24A3Q9HC58 644 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 NOB1Q9ULX3 412 aaKnown RBP6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 ZNF451Q9Y4E5 1061 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 MTMR11A4FU01 709 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 STMND1H3BQB6 276 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 CBX4O00257 560 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 TRAK2O60296 914 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 TSPAN1O60635 241 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 PRKCBP05771 671 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 FOXM1Q08050 763 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 PDCD2Q16342 344 aaPredicted RBP6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 UPP1Q16831 310 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 ZMYM1Q5SVZ6 1142 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 NAIF1Q69YI7 327 aaPredicted RBP6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 NAPEPLDQ6IQ20 393 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 TERB1Q8NA31 727 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 PRCCQ92733 491 aaPredicted RBP6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 TRIT1Q9H3H1 467 aaKnown RBP6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 BOLA2Q9H3K6 86 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 MLXIPLQ9NP71 852 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 PCDHA12Q9UN75 941 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 CSPG4Q6UVK1 2322 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 ANKUB1A6NFN9 424 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 INHBBP09529 407 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 VAV1P15498 845 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 U2AF2P26368 475 aaKnown RBP eCLIP6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 CD38P28907 300 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 MEOX1P50221 254 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 AP3B2Q13367 1082 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 MRPL49Q13405 166 aaKnown RBP6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 TFDP1Q14186 410 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 KIAA1324Q6UXG2 1013 aaKnown RBP6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 USP30Q70CQ3 517 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 EFCAB13Q8IY85 973 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 EPS8L1Q8TE68 723 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 PNPLA2Q96AD5 504 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 ZFP42Q96MM3 310 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 MENTQ9BUN1 341 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 PCDHB5Q9Y5E4 795 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 ATRQ13535 2644 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 PPP6R2O75170 966 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 CTDSPL2Q05D32 466 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 DHCR24Q15392 516 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 PPP1R18Q6NYC8 613 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 MFSD6Q6ZSS7 791 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 PSPC1Q8WXF1 523 aaKnown RBP6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 MYRFLQ96LU7 910 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 SPZ1Q9BXG8 430 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 RBM28Q9NW13 759 aaKnown RBP6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 GCNT4Q9P109 453 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 JMJD1CQ15652 2540 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 STK36Q9NRP7 1315 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 NOL4O94818 638 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 CYP3A4P08684 503 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 ABL2P42684 1182 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 PTENP60484 403 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 PRKCEQ02156 737 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 LONRF3Q496Y0 759 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 IFI44Q8TCB0 444 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 GOLGA1Q92805 767 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 GLMNQ92990 594 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 MAD2L2Q9UI95 211 aa6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 UTP20O75691 2785 aaKnown RBP6.91□□□□□ -1.3
BRAFP1-201ENST00000445336 NEDD4P46934 1319 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 LY6G6EA0A0G2JKS1 128 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 TBC1D3BA6NDS4 549 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 TPP1O14773 563 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 RNGTTO60942 597 aaKnown RBP6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 STSP08842 583 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 ADH5P11766 374 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 TYMPP19971 482 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 GRM5P41594 1212 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 RPIAP49247 311 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 IL9RQ01113 521 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 MXD4Q14582 209 aaPredicted RBP6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 KCNT1Q5JUK3 1230 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 TMEM164Q5U3C3 297 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 RAB11FIP2Q7L804 512 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 VAT1LQ9HCJ6 419 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 TNFRSF10DQ9UBN6 386 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 GABBR1Q9UBS5 961 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 PCDHA6Q9UN73 950 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 DMTF1Q9Y222 760 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 U3KQA8 63 aa6.9□□□□□ -1.3
BRAFP1-201ENST00000445336 NEMP2A6NFY4 417 aa6.9□□□□□ -1.31
BRAFP1-201ENST00000445336 KCNJ18B7U540 433 aa6.9□□□□□ -1.31
BRAFP1-201ENST00000445336 TLR4O00206 839 aa6.9□□□□□ -1.31
BRAFP1-201ENST00000445336 VNN2O95498 520 aa6.9□□□□□ -1.31
BRAFP1-201ENST00000445336 SEMA4FO95754 770 aa6.9□□□□□ -1.31
BRAFP1-201ENST00000445336 CSH1P0DML2 217 aa6.9□□□□□ -1.31
BRAFP1-201ENST00000445336 CSH2P0DML3 217 aa6.9□□□□□ -1.31
BRAFP1-201ENST00000445336 RECQLP46063 649 aaPredicted RBP6.9□□□□□ -1.31
BRAFP1-201ENST00000445336 PPP3CCP48454 512 aa6.9□□□□□ -1.31
BRAFP1-201ENST00000445336 FAM187BQ17R55 369 aa6.9□□□□□ -1.31
BRAFP1-201ENST00000445336 SLFNL1Q499Z3 407 aa6.9□□□□□ -1.31
BRAFP1-201ENST00000445336 ZCCHC8Q6NZY4 707 aaKnown RBP6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms