RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 PBXIP1Q96AQ6 731 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 PWWP2AQ96N64 755 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 ZNF142P52746 1687 aaPredicted RBP17.22■□□□□ 0.35
TCOF1-206ENST00000445265 M0QYT0 321 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 APOEP02649 317 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 NDST1P52848 882 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 RPL7AP62424 266 aaKnown RBP17.22■□□□□ 0.35
TCOF1-206ENST00000445265 LRRC8EQ6NSJ5 796 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 SLC38A7Q9NVC3 462 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 E2F8A0AVK6 867 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 FAM200BP0CF97 657 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 RALBP11234 206 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 SLC34A1Q06495 639 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 TMEM62Q0P6H9 643 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 PDE1CQ14123 709 aaPredicted RBP17.22■□□□□ 0.35
TCOF1-206ENST00000445265 SNX30Q5VWJ9 437 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 PRUNE1Q86TP1 453 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 ZDHHC17Q8IUH5 632 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 ACSS3Q9H6R3 686 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 ARHGEF38Q9NXL2 777 aa17.22■□□□□ 0.35
TCOF1-206ENST00000445265 NOCTQ9UK39 431 aaKnown RBP17.22■□□□□ 0.35
TCOF1-206ENST00000445265 CDH8P55286 799 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 NCALDP61601 193 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 MGAT5Q09328 741 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 PTP4A2Q12974 167 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 ANO4Q32M45 955 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 ANKRD13AQ8IZ07 590 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 CALML6Q8TD86 181 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 TMA16Q96EY4 203 aaKnown RBP17.21■□□□□ 0.35
TCOF1-206ENST00000445265 ZBTB18Q99592 522 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 THAP1Q9NVV9 213 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 LRCH1Q9Y2L9 728 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 A0A087WZ62 844 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 PCSK1P29120 753 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 RPL22P35268 128 aaKnown RBP17.21■□□□□ 0.35
TCOF1-206ENST00000445265 CEP70Q8NHQ1 597 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 USP33Q8TEY7 942 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 FDXACB1Q9BRP7 624 aaPredicted RBP17.21■□□□□ 0.35
TCOF1-206ENST00000445265 OSBPL7Q9BZF2 842 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 FHDC1Q9C0D6 1143 aaPredicted RBP17.21■□□□□ 0.35
TCOF1-206ENST00000445265 SPATC1LQ9H0A9 340 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 CYP39A1Q9NYL5 469 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 GRHL1Q9NZI5 618 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 AJAP1Q9UKB5 411 aaPredicted RBP17.21■□□□□ 0.35
TCOF1-206ENST00000445265 CCDC78A2IDD5 438 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 SNX2O60749 519 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 THRAP10827 490 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 RIPK1Q13546 671 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 KBTBD12Q3ZCT8 623 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 SIKE1Q9BRV8 207 aa17.21■□□□□ 0.35
TCOF1-206ENST00000445265 BAZ2AQ9UIF9 1905 aaKnown RBP17.21■□□□□ 0.35
TCOF1-206ENST00000445265 CHADO15335 359 aa17.21■□□□□ 0.34
TCOF1-206ENST00000445265 DYNC1LI2O43237 492 aaPredicted RBP17.21■□□□□ 0.34
TCOF1-206ENST00000445265 DGKDQ16760 1214 aa17.21■□□□□ 0.34
TCOF1-206ENST00000445265 PLEKHA7Q6IQ23 1121 aa17.21■□□□□ 0.34
TCOF1-206ENST00000445265 DENND1BQ6P3S1 775 aa17.21■□□□□ 0.34
TCOF1-206ENST00000445265 SKA2Q8WVK7 121 aaPredicted RBP17.21■□□□□ 0.34
TCOF1-206ENST00000445265 JADE3Q92613 823 aa17.21■□□□□ 0.34
TCOF1-206ENST00000445265 ELMO2Q96JJ3 720 aa17.21■□□□□ 0.34
TCOF1-206ENST00000445265 CCDC134Q9H6E4 229 aa17.21■□□□□ 0.34
TCOF1-206ENST00000445265 IL10P22301 178 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 GCLCP48506 637 aaPredicted RBP17.2■□□□□ 0.34
TCOF1-206ENST00000445265 NR2C2P49116 596 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 TGFB2P61812 414 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 SNAPC2Q13487 334 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 SH3BP5LQ7L8J4 393 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 OR5B17Q8NGF7 314 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 EME1Q96AY2 570 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 MYH6P13533 1939 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 TMEM191CA6NGB0 347 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 CPA3P15088 417 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 BST2Q10589 180 aaKnown RBP17.2■□□□□ 0.34
TCOF1-206ENST00000445265 CYP1B1Q16678 543 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 SPOUT1Q5T280 376 aaKnown RBP17.2■□□□□ 0.34
TCOF1-206ENST00000445265 MAGEC3Q8TD91 643 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 SHCBP1LQ9BZQ2 653 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 MMADHCQ9H3L0 296 aaPredicted RBP17.2■□□□□ 0.34
TCOF1-206ENST00000445265 MROH8Q9H579 483 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 SAE1Q9UBE0 346 aaPredicted RBP17.2■□□□□ 0.34
TCOF1-206ENST00000445265 PPP2R3BQ9Y5P8 575 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 ASS1P00966 412 aaKnown RBP17.2■□□□□ 0.34
TCOF1-206ENST00000445265 RPL10AP62906 217 aaKnown RBP17.2■□□□□ 0.34
TCOF1-206ENST00000445265 PHEXP78562 749 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 FAM131BQ86XD5 332 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 KCNK4Q9NYG8 393 aa17.2■□□□□ 0.34
TCOF1-206ENST00000445265 RPL26L1Q9UNX3 145 aaKnown RBP17.2■□□□□ 0.34
TCOF1-206ENST00000445265 R3HDM2Q9Y2K5 976 aaKnown RBP17.2■□□□□ 0.34
TCOF1-206ENST00000445265 PLSCR1O15162 318 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 PMM2O15305 246 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 PGK2P07205 417 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 NCAM1P13591 858 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 MMP8P22894 467 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 CNTN2Q02246 1040 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 FLOT2Q14254 428 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 C4orf50Q6ZRC1 276 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 NT5DC4Q86YG4 428 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 FBXO16Q8IX29 292 aaPredicted RBP17.19■□□□□ 0.34
TCOF1-206ENST00000445265 TBC1D10AQ9BXI6 508 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 PHACTR1Q9C0D0 580 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 DNAJC5Q9H3Z4 198 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms