RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ZFXP17010 805 aaPredicted RBP16.36■□□□□ 0.21
SNX13-204ENST00000444712 STIP1P31948 543 aaKnown RBP16.36■□□□□ 0.21
SNX13-204ENST00000444712 ACTN2P35609 894 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 EIF3EP60228 445 aaKnown RBP16.36■□□□□ 0.21
SNX13-204ENST00000444712 GPS1Q13098 491 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 PSTKQ8IV42 348 aaKnown RBP16.36■□□□□ 0.21
SNX13-204ENST00000444712 SH2D3CQ8N5H7 860 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 TMEM121Q9BTD3 319 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 SNRNP25Q9BV90 132 aaKnown RBP16.36■□□□□ 0.21
SNX13-204ENST00000444712 AAASQ9NRG9 546 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 STAP1Q9ULZ2 295 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 CFAP69A5D8W1 941 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 CASTOR2A6NHX0 329 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 APOL1O14791 398 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 TTC4O95801 387 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 CYP11A1P05108 521 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 ACAT1P24752 427 aaKnown RBP16.36■□□□□ 0.21
SNX13-204ENST00000444712 HDAC4P56524 1084 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 MRPS5P82675 430 aaKnown RBP16.36■□□□□ 0.21
SNX13-204ENST00000444712 ADIGQ0VDE8 80 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 NOMO1Q15155 1222 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 CLEC20AQ6ZU45 233 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 ECHDC2Q86YB7 292 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 RNF169Q8NCN4 708 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 TTC25Q96NG3 672 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 PCDH18Q9HCL0 1135 aa16.36■□□□□ 0.21
SNX13-204ENST00000444712 BCCIPQ9P287 314 aaKnown RBP eCLIP16.36■□□□□ 0.218e-7■■■■□ 21.9
SNX13-204ENST00000444712 ATP2C2O75185 946 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 EOMESO95936 686 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 CKBP12277 381 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 CHKAP35790 457 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 ROR1Q01973 937 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 DPYSL2Q16555 572 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 SLC25A52Q3SY17 297 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 FAM35AQ86V20 835 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 MYCBPAPQ8TBZ2 947 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 FAF2Q96CS3 445 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 SMARCD1Q96GM5 515 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 RGS18Q9NS28 235 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 KRT82Q9NSB4 513 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 RGS16O15492 202 aaPredicted RBP16.35■□□□□ 0.21
SNX13-204ENST00000444712 AGTP01019 485 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 IFNB1P01574 187 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 INHAP05111 366 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 IVLP07476 585 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 RBP3P10745 1247 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 ATP5DP30049 168 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 NOS2P35228 1153 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 APLP1P51693 650 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 YWHAZP63104 245 aaKnown RBP16.35■□□□□ 0.21
SNX13-204ENST00000444712 ANKRD20A8PQ5CZ79 823 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 SLC9A4Q6AI14 798 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 PAQR9Q6ZVX9 377 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 SLC43A3Q8NBI5 491 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 CLEC4CQ8WTT0 213 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 ACBD6Q9BR61 282 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 CCDC77Q9BR77 488 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 CNOT10Q9H9A5 744 aaKnown RBP16.35■□□□□ 0.21
SNX13-204ENST00000444712 CRTAC1Q9NQ79 661 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 STARD7Q9NQZ5 370 aa16.35■□□□□ 0.21
SNX13-204ENST00000444712 RCOR3Q9P2K3 495 aaPredicted RBP16.35■□□□□ 0.21
SNX13-204ENST00000444712 NOVA2Q9UNW9 492 aaKnown RBP16.35■□□□□ 0.21
SNX13-204ENST00000444712 RASGRF2O14827 1237 aa16.34■□□□□ 0.21
SNX13-204ENST00000444712 SHBGP04278 402 aa16.34■□□□□ 0.21
SNX13-204ENST00000444712 MAPRE1Q15691 268 aaKnown RBP16.34■□□□□ 0.21
SNX13-204ENST00000444712 TIGD5Q53EQ6 642 aa16.34■□□□□ 0.21
SNX13-204ENST00000444712 RNASEH2BQ5TBB1 312 aaKnown RBP16.34■□□□□ 0.21
SNX13-204ENST00000444712 ZNF598Q86UK7 904 aaKnown RBP16.34■□□□□ 0.21
SNX13-204ENST00000444712 PPIL6Q8IXY8 311 aa16.34■□□□□ 0.21
SNX13-204ENST00000444712 C3orf58Q8NDZ4 430 aa16.34■□□□□ 0.21
SNX13-204ENST00000444712 FAM149B1Q96BN6 582 aa16.34■□□□□ 0.21
SNX13-204ENST00000444712 TLCD1Q96CP7 247 aa16.34■□□□□ 0.21
SNX13-204ENST00000444712 FTHL17Q9BXU8 183 aa16.34■□□□□ 0.21
SNX13-204ENST00000444712 ADAM7Q9H2U9 754 aa16.34■□□□□ 0.21
SNX13-204ENST00000444712 CNGB3Q9NQW8 809 aa16.34■□□□□ 0.21
SNX13-204ENST00000444712 AP4E1Q9UPM8 1137 aa16.34■□□□□ 0.21
SNX13-204ENST00000444712 PATJQ8NI35 1801 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 A0A1W2PQ45 241 aaPredicted RBP16.33■□□□□ 0.21
SNX13-204ENST00000444712 A0A1W2PQY0 241 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 M0QZQ0 153 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 CLDN5O00501 218 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 AP1G2O75843 785 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 B3GAT3O94766 335 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 POMCP01189 267 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 ABHD2P08910 425 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 SULT1E1P49888 294 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 AFF1P51825 1210 aaKnown RBP16.33■□□□□ 0.21
SNX13-204ENST00000444712 AIF1P55008 147 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 BCAR1P56945 870 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 PPP2R2AP63151 447 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 GNGT1P63211 74 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 ADCY1Q08828 1119 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 MMRN1Q13201 1228 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 DNAJC21Q5F1R6 531 aaKnown RBP16.33■□□□□ 0.21
SNX13-204ENST00000444712 MFSD5Q6N075 450 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 DARS2Q6PI48 645 aaKnown RBP16.33■□□□□ 0.21
SNX13-204ENST00000444712 DCLRE1AQ6PJP8 1040 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 GLB1LQ6UWU2 654 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 SLC24A5Q71RS6 500 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 DEFB106AQ8N104 65 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms