RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 SIPA1Q96FS4 1042 aa15.25■□□□□ 0.03
SYNCRIP-203ENST00000444272 HSD17B14Q9BPX1 270 aa15.25■□□□□ 0.03
SYNCRIP-203ENST00000444272 TMLHEQ9NVH6 421 aa15.25■□□□□ 0.03
SYNCRIP-203ENST00000444272 CFAP97Q9P2B7 532 aa15.25■□□□□ 0.03
SYNCRIP-203ENST00000444272 PLXNA2O75051 1894 aa15.25■□□□□ 0.03
SYNCRIP-203ENST00000444272 PHLPP2Q6ZVD8 1323 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 A1L4Q6 167 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 PRRT4C9JH25 899 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 K7ERI5 159 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 CYP11A1P05108 521 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 ACADMP11310 421 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 ACP1P24666 158 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 RBMS1P29558 406 aaKnown RBP15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 AKAP17AQ02040 695 aaKnown RBP15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 STARD3Q14849 445 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 PPP2R5AQ15172 486 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 ANO4Q32M45 955 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 C3orf38Q5JPI3 329 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 GRAMD4Q6IC98 578 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 DCP1BQ8IZD4 617 aaKnown RBP15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 THEM5Q8N1Q8 247 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 SCFD1Q8WVM8 642 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 DEPDC7Q96QD5 511 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 ACE2Q9BYF1 805 aaPredicted RBP15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 PCED1AQ9H1Q7 454 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 POLD4Q9HCU8 107 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 UBQLN1Q9UMX0 589 aaKnown RBP15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 PCDHA4Q9UN74 947 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 SATB2Q9UPW6 733 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 PLAAQ9Y263 795 aa15.24■□□□□ 0.03
SYNCRIP-203ENST00000444272 PCNX1Q96RV3 2341 aa15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 TCHHQ07283 1943 aa15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 LRRK1Q38SD2 2015 aa15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 A0A1B0GTL3 188 aa15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 GFRA2O00451 464 aa15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 HOXC11O43248 304 aaPredicted RBP15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 CSO75390 466 aaKnown RBP15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 AGFG2O95081 481 aa15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 IGLV3-19P01714 112 aa15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 CXCL8P10145 99 aa15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 EPHA8P29322 1005 aaPredicted RBP15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 CASRP41180 1078 aa15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 ASIC1P78348 528 aa15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 SLC7A9P82251 487 aa15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 B4GALNT3Q6L9W6 998 aa15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 TMPRSS6Q8IU80 811 aa15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 PRCCQ92733 491 aaPredicted RBP15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 BIRC7Q96CA5 298 aa15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 TARS2Q9BW92 718 aaKnown RBP15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 RCAN3Q9UKA8 241 aa15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 ARID1BQ8NFD5 2236 aaPredicted RBP15.23■□□□□ 0.03
SYNCRIP-203ENST00000444272 ZFC3H1O60293 1989 aaKnown RBP15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 ABLIM1O14639 778 aa15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 GJB6O95452 261 aa15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 CYP3A5P20815 502 aa15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 CYP2F1P24903 491 aa15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 CD27P26842 260 aa15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 COL8A1P27658 744 aa15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 ACSL1P33121 698 aa15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 GRIN1Q05586 938 aa15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 CDCP2Q5VXM1 449 aa15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 IGF2-ASQ6U949 168 aa15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 MPZL3Q6UWV2 235 aa15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 METTL23Q86XA0 190 aa15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 IFT74Q96LB3 600 aa15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 MRPL4Q9BYD3 311 aaKnown RBP15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 RNF38Q9H0F5 515 aa15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 DNAJC17Q9NVM6 304 aaKnown RBP15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 GEMIN8Q9NWZ8 242 aaKnown RBP15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 TBC1D14Q9P2M4 693 aa15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 ATXN7L1Q9ULK2 861 aaPredicted RBP15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 STON1Q9Y6Q2 735 aa15.22■□□□□ 0.03
SYNCRIP-203ENST00000444272 MED13Q9UHV7 2174 aa15.21■□□□□ 0.03
SYNCRIP-203ENST00000444272 CCDC196A0A1B0GTZ2 297 aa15.21■□□□□ 0.03
SYNCRIP-203ENST00000444272 M0R2N6 131 aa15.21■□□□□ 0.03
SYNCRIP-203ENST00000444272 VILLO15195 856 aa15.21■□□□□ 0.03
SYNCRIP-203ENST00000444272 FSBPO95073 299 aa15.21■□□□□ 0.03
SYNCRIP-203ENST00000444272 PROZP22891 400 aa15.21■□□□□ 0.03
SYNCRIP-203ENST00000444272 DCTP40126 519 aa15.21■□□□□ 0.03
SYNCRIP-203ENST00000444272 BNIP3Q12983 259 aa15.21■□□□□ 0.03
SYNCRIP-203ENST00000444272 ZBTB6Q15916 424 aa15.21■□□□□ 0.03
SYNCRIP-203ENST00000444272 TBR1Q16650 682 aa15.21■□□□□ 0.03
SYNCRIP-203ENST00000444272 BLIDQ8IZY5 108 aa15.21■□□□□ 0.03
SYNCRIP-203ENST00000444272 ZBTB45Q96K62 511 aaPredicted RBP15.21■□□□□ 0.03
SYNCRIP-203ENST00000444272 SLC46A1Q96NT5 459 aa15.21■□□□□ 0.03
SYNCRIP-203ENST00000444272 DSEQ9UL01 958 aa15.21■□□□□ 0.03
SYNCRIP-203ENST00000444272 SLC27A2O14975 620 aa15.2■□□□□ 0.02
SYNCRIP-203ENST00000444272 YKT6O15498 198 aa15.2■□□□□ 0.02
SYNCRIP-203ENST00000444272 SGSM2O43147 1006 aa15.2■□□□□ 0.02
SYNCRIP-203ENST00000444272 CCNT1O60563 726 aaKnown RBP15.2■□□□□ 0.02
SYNCRIP-203ENST00000444272 XRCC6P12956 609 aaKnown RBP eCLIP15.2■□□□□ 0.02
SYNCRIP-203ENST00000444272 PFKLP17858 780 aa15.2■□□□□ 0.02
SYNCRIP-203ENST00000444272 CLCA4Q14CN2 919 aa15.2■□□□□ 0.02
SYNCRIP-203ENST00000444272 PROX2Q3B8N5 592 aa15.2■□□□□ 0.02
SYNCRIP-203ENST00000444272 KANSL1Q7Z3B3 1105 aa15.2■□□□□ 0.02
SYNCRIP-203ENST00000444272 TMEM25Q86YD3 366 aa15.2■□□□□ 0.02
SYNCRIP-203ENST00000444272 NSUN7Q8NE18 718 aaKnown RBP15.2■□□□□ 0.02
SYNCRIP-203ENST00000444272 SLC26A6Q9BXS9 759 aa15.2■□□□□ 0.02
SYNCRIP-203ENST00000444272 SPHK2Q9NRA0 654 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms