RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 FBXO6Q9NRD1 293 aaPredicted RBP17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 ARL8BQ9NVJ2 186 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 C2CD4BA6NLJ0 364 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 LIN7AO14910 233 aaPredicted RBP17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 GYG2O15488 501 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 KCNN4O15554 427 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 IL1BP01584 269 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 ATICP31939 592 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 PTDSS1P48651 473 aaKnown RBP17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 MBTD1Q05BQ5 628 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 C15orf59Q2T9L4 293 aaPredicted RBP17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 LGSNQ5TDP6 509 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 JADE1Q6IE81 842 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 OR6B2Q6IFH4 312 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 EFCAB12Q6NXP0 572 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 CCDC62Q6P9F0 684 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 PPM1NQ8N819 430 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 MICAL1Q8TDZ2 1067 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 PTCD3Q96EY7 689 aaKnown RBP17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 SRPK1Q96SB4 655 aaKnown RBP17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 SPATC1LQ9H0A9 340 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 MINDY3Q9H8M7 445 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 CNTN3Q9P232 1028 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 TRIM49D1C9J1S8 452 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 GPR25O00155 361 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 SKAP2O75563 359 aaPredicted RBP17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 GCKP35557 465 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 CYP4V2Q6ZWL3 525 aaPredicted RBP17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 PRPF39Q86UA1 669 aaKnown RBP17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 TMEM130Q8N3G9 435 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 MPHOSPH6Q99547 160 aaKnown RBP17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 VRTNQ9H8Y1 702 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 USP29Q9HBJ7 922 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 SPATS2LQ9NUQ6 558 aaKnown RBP17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 ZC3H7BQ9UGR2 993 aaKnown RBP17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 ANKRD33BA6NCL7 494 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 PIK3R2O00459 728 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 IRF6O14896 467 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 KLF11O14901 512 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 GSC2O15499 205 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 SNRPAP09012 282 aaKnown RBP17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 STAG3L1P0CL83 205 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 CLCN3P51790 818 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 BLMHQ13867 455 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 CELF3Q5SZQ8 465 aaKnown RBP17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 TRIM68Q6AZZ1 485 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 TEX9Q8N6V9 391 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 PLD5Q8N7P1 536 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 MCUR1Q96AQ8 359 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 KLC2Q9H0B6 622 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 ASCC2Q9H1I8 757 aaPredicted RBP17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 ZNF180Q9UJW8 692 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 HEY1Q9Y5J3 304 aa17.16■□□□□ 0.34
SEMA3B-207ENST00000441915 E5RJQ4 531 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 ZBED1O96006 694 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 MYL2P10916 166 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 BCAR1P56945 870 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 YWHAZP63104 245 aaKnown RBP17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 PDK2Q15119 407 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 SCYL2Q6P3W7 929 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 VPS52Q8N1B4 723 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 PRMT7Q9NVM4 692 aaPredicted RBP17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 GRAP2O75791 330 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 FAM155BO75949 473 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 IQCF3P0C7M6 154 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 ESRRAP11474 423 aaPredicted RBP17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 OSBPP22059 807 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 GCLCP48506 637 aaPredicted RBP17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 CBLBQ13191 982 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 KRT72Q14CN4 511 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 KHDC1Q4VXA5 237 aaKnown RBP17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 RAB6CQ53S08 254 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 BOLA3Q53S33 107 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 TRNP1Q6NT89 227 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 FAM183BPQ6ZVS7 135 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.15■□□□□ 0.341e-12■□□□□ 9.5
SEMA3B-207ENST00000441915 SLC16A10Q8TF71 515 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 OXNAD1Q96HP4 312 aaPredicted RBP17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 HPDLQ96IR7 371 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 SPATA33Q96N06 139 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 SH3GL3Q99963 347 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 FAM167BQ9BTA0 163 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 RAB6CQ9H0N0 254 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 STOML1Q9UBI4 398 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 BARX2Q9UMQ3 279 aaPredicted RBP17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 TTLL3Q9Y4R7 772 aa17.15■□□□□ 0.34
SEMA3B-207ENST00000441915 I3L4J1 428 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 TRDMT1O14717 391 aaKnown RBP17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 APOL1O14791 398 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 SMNDC1O75940 238 aaKnown RBP eCLIP17.14■□□□□ 0.334e-6■■□□□ 12
SEMA3B-207ENST00000441915 APRTP07741 180 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 TGM2P21980 687 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 RBL1P28749 1068 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 SLC26A2P50443 739 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 TNFAIP2Q03169 654 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 TSNAXIP1Q2TAA8 658 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 RFWD3Q6PCD5 774 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 DSTYKQ6XUX3 929 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 CDHR3Q6ZTQ4 885 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 ILDR2Q71H61 639 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms