RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 FAM71AQ8IYT1 594 aa18.98■□□□□ 0.63
CPSF4-205ENST00000440514 FLCNQ8NFG4 579 aa18.98■□□□□ 0.63
CPSF4-205ENST00000440514 SLC35F5Q8WV83 523 aa18.98■□□□□ 0.63
CPSF4-205ENST00000440514 ZNF606Q8WXB4 792 aa18.98■□□□□ 0.63
CPSF4-205ENST00000440514 NDRG1Q92597 394 aaKnown RBP18.98■□□□□ 0.63
CPSF4-205ENST00000440514 IRF7Q92985 503 aa18.98■□□□□ 0.63
CPSF4-205ENST00000440514 PCMTD1Q96MG8 357 aaPredicted RBP18.98■□□□□ 0.63
CPSF4-205ENST00000440514 NAGPAQ9UK23 515 aa18.98■□□□□ 0.63
CPSF4-205ENST00000440514 F8VZ95 297 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 LEFTY2O00292 366 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 SCAMP3O14828 347 aaKnown RBP18.97■□□□□ 0.63
CPSF4-205ENST00000440514 MED7O43513 233 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 LCP1P13796 627 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 CLCN1P35523 988 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 POLR2FP61218 127 aaKnown RBP18.97■□□□□ 0.63
CPSF4-205ENST00000440514 TNK2Q07912 1038 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 SLC44A4Q53GD3 710 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 TRIM68Q6AZZ1 485 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 TPRG1Q6ZUI0 275 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 BHLHA9Q7RTU4 235 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 SLC47A2Q86VL8 602 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 PASD1Q8IV76 773 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 SIX6OS1Q8N1H7 587 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 FBXL6Q8N531 539 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 TTC8Q8TAM2 541 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 KCTD13Q8WZ19 329 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 ZFRQ96KR1 1074 aaKnown RBP18.97■□□□□ 0.63
CPSF4-205ENST00000440514 ERGIC2Q96RQ1 377 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 NACA2Q9H009 215 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 TBC1D17Q9HA65 648 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 NLRC4Q9NPP4 1024 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 CYLDQ9NQC7 956 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 THG1LQ9NWX6 298 aaKnown RBP18.97■□□□□ 0.63
CPSF4-205ENST00000440514 CYTH4Q9UIA0 394 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 NUDT5Q9UKK9 219 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 WNT6Q9Y6F9 365 aa18.97■□□□□ 0.63
CPSF4-205ENST00000440514 MDM4O15151 490 aa18.96■□□□□ 0.63
CPSF4-205ENST00000440514 TEX33O43247 280 aa18.96■□□□□ 0.63
CPSF4-205ENST00000440514 TBX18O95935 607 aa18.96■□□□□ 0.63
CPSF4-205ENST00000440514 ZBED1O96006 694 aa18.96■□□□□ 0.63
CPSF4-205ENST00000440514 RARGP13631 454 aa18.96■□□□□ 0.63
CPSF4-205ENST00000440514 TCF3P15923 654 aa18.96■□□□□ 0.63
CPSF4-205ENST00000440514 GPD2P43304 727 aa18.96■□□□□ 0.63
CPSF4-205ENST00000440514 VCPP55072 806 aaKnown RBP18.96■□□□□ 0.63
CPSF4-205ENST00000440514 PTK2Q05397 1052 aa18.96■□□□□ 0.63
CPSF4-205ENST00000440514 STK33Q9BYT3 514 aa18.96■□□□□ 0.63
CPSF4-205ENST00000440514 GKN1Q9NS71 199 aa18.96■□□□□ 0.63
CPSF4-205ENST00000440514 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.96■□□□□ 0.63
CPSF4-205ENST00000440514 GTSE1Q9NYZ3 720 aa18.96■□□□□ 0.63
CPSF4-205ENST00000440514 CFAP97Q9P2B7 532 aa18.96■□□□□ 0.63
CPSF4-205ENST00000440514 IRF1P10914 325 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 ARSAP15289 507 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 CD72P21854 359 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 SOX9P48436 509 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 YWHAGP61981 247 aaKnown RBP eCLIP18.95■□□□□ 0.62
CPSF4-205ENST00000440514 TPM4P67936 248 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 PLCB2Q00722 1185 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 MEA1Q16626 185 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 C10orf120Q5SQS8 335 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 PM20D1Q6GTS8 502 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 CC2D1AQ6P1N0 951 aaPredicted RBP18.95■□□□□ 0.62
CPSF4-205ENST00000440514 SUGP1Q8IWZ8 645 aaKnown RBP18.95■□□□□ 0.62
CPSF4-205ENST00000440514 NEK11Q8NG66 645 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 CSGALNACT1Q8TDX6 532 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 CLEC4CQ8WTT0 213 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 FAM83CQ9BQN1 747 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 FOXQ1Q9C009 403 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 EBF3Q9H4W6 596 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 TRPV5Q9NQA5 729 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 RTN4Q9NQC3 1192 aaKnown RBP18.95■□□□□ 0.62
CPSF4-205ENST00000440514 HPS4Q9NQG7 708 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 PIAS3Q9Y6X2 628 aa18.95■□□□□ 0.62
CPSF4-205ENST00000440514 SHISA7A6NL88 538 aa18.94■□□□□ 0.62
CPSF4-205ENST00000440514 YJEFN3A6XGL0 299 aa18.94■□□□□ 0.62
CPSF4-205ENST00000440514 E7ENQ6 273 aa18.94■□□□□ 0.62
CPSF4-205ENST00000440514 STK25O00506 426 aa18.94■□□□□ 0.62
CPSF4-205ENST00000440514 IFNAR2P48551 515 aa18.94■□□□□ 0.62
CPSF4-205ENST00000440514 PSEN1P49768 467 aa18.94■□□□□ 0.62
CPSF4-205ENST00000440514 JAM2P57087 298 aa18.94■□□□□ 0.62
CPSF4-205ENST00000440514 DAOAP59103 153 aa18.94■□□□□ 0.62
CPSF4-205ENST00000440514 PRKCQQ04759 706 aa18.94■□□□□ 0.62
CPSF4-205ENST00000440514 ARHGAP18Q8N392 663 aa18.94■□□□□ 0.62
CPSF4-205ENST00000440514 WBP2Q969T9 261 aa18.94■□□□□ 0.62
CPSF4-205ENST00000440514 MIS12Q9H081 205 aa18.94■□□□□ 0.62
CPSF4-205ENST00000440514 ST7Q9NRC1 585 aa18.94■□□□□ 0.62
CPSF4-205ENST00000440514 DUS2Q9NX74 493 aaKnown RBP18.94■□□□□ 0.62
CPSF4-205ENST00000440514 CLIC5Q9NZA1 410 aa18.94■□□□□ 0.62
CPSF4-205ENST00000440514 PCDHGC3Q9UN70 934 aa18.94■□□□□ 0.62
CPSF4-205ENST00000440514 A0A1B0GTH6 734 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 GOLGA6L19H0YKK7 550 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 GFPT2O94808 682 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 SERPINC1P01008 464 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 RALAP11233 206 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 ATP5C1P36542 298 aaKnown RBP18.93■□□□□ 0.62
CPSF4-205ENST00000440514 KPNA1P52294 538 aaPredicted RBP18.93■□□□□ 0.62
CPSF4-205ENST00000440514 STARD6P59095 220 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 PDCLQ13371 301 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 FILIP1LQ4L180 1135 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 TAF3Q5VWG9 929 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 DDX42Q86XP3 938 aaKnown RBP eCLIP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms