RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 MYLPFQ96A32 169 aa15.31■□□□□ 0.04
TNFRSF1A-204ENST00000440083 TWNKQ96RR1 684 aa15.31■□□□□ 0.04
TNFRSF1A-204ENST00000440083 SEPT5Q99719 369 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF1A-204ENST00000440083 PRKD2Q9BZL6 878 aa15.31■□□□□ 0.04
TNFRSF1A-204ENST00000440083 ZNF518BQ9C0D4 1074 aa15.31■□□□□ 0.04
TNFRSF1A-204ENST00000440083 POMKQ9H5K3 350 aa15.31■□□□□ 0.04
TNFRSF1A-204ENST00000440083 HCFC1R1Q9NWW0 138 aa15.31■□□□□ 0.04
TNFRSF1A-204ENST00000440083 ZDHHC7Q9NXF8 308 aa15.31■□□□□ 0.04
TNFRSF1A-204ENST00000440083 DPP7Q9UHL4 492 aa15.31■□□□□ 0.04
TNFRSF1A-204ENST00000440083 ANAPC7Q9UJX3 599 aa15.31■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CDH9Q9ULB4 789 aa15.31■□□□□ 0.04
TNFRSF1A-204ENST00000440083 PCDHGC3Q9UN70 934 aa15.31■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CILPO75339 1184 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 ERLIN1O75477 346 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 RRM1P23921 792 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 GPR15P49685 360 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 NDST1P52848 882 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CBX2Q14781 532 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 BRD3Q15059 726 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 TJAP1Q5JTD0 557 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 SDHAF4Q5VUM1 108 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 TMCO3Q6UWJ1 677 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CCDC149Q6ZUS6 474 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 DENND4AQ7Z401 1863 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 GRASPQ7Z6J2 395 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 C1orf131Q8NDD1 294 aaKnown RBP15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 ACTRT1Q8TDG2 376 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 TMEM176AQ96HP8 235 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 MS4A14Q96JA4 679 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 PARD6BQ9BYG5 372 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 ANKZF1Q9H8Y5 726 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 PIDD1Q9HB75 910 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 SMARCAL1Q9NZC9 954 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 EHD2Q9NZN4 543 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 ALG6Q9Y672 507 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 C5orf42Q9H799 3197 aa15.3■□□□□ 0.04
TNFRSF1A-204ENST00000440083 TARSL2A2RTX5 802 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 NRG2O14511 850 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 LRG1P02750 347 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CFHP08603 1231 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 HNRNPA1P09651 372 aaKnown RBP eCLIP15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 VDRP11473 427 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 PTPN1P18031 435 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 COMTP21964 271 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CYP2F1P24903 491 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 MTHFRP42898 656 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 RAD23BP54727 409 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 INCA1Q0VD86 236 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 PUS10Q3MIT2 529 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 MGAT5BQ3V5L5 792 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 SEL1L2Q5TEA6 688 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 C8orf74Q6P047 294 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 DNAJC24Q6P3W2 148 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 FAM171BQ6P995 826 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 ACOT1Q86TX2 421 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 B3GALNT2Q8NCR0 500 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 GPR152Q8TDT2 470 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 ADAMTS19Q8TE59 1207 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 WHAMMQ8TF30 809 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 RUBCNQ92622 972 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 RIPOR3Q96MK2 946 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 NAP1L3Q99457 506 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 ZSWIM1Q9BR11 485 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 ELOVL4Q9GZR5 314 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CARD9Q9H257 536 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 EPC1Q9H2F5 836 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CHORDC1Q9UHD1 332 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 LCMT1Q9UIC8 334 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 STRIP2Q9ULQ0 834 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 PCDHB5Q9Y5E4 795 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 NOTCH4Q99466 2003 aa15.29■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CLUHO75153 1309 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 PTPRDP23468 1912 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CCDC66A2RUB6 948 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CLDN5O00501 218 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 DDX3YO15523 660 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 PAPLNO95428 1278 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 HAPLN1P10915 354 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 ATF6P18850 670 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CTNNA2P26232 953 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 HOXA9P31269 272 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CDH5P33151 784 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CLCN6P51797 869 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 STILQ15468 1287 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 SGO2Q562F6 1265 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 ATAT1Q5SQI0 421 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 DENND1BQ6P3S1 775 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 ERICH1Q86X53 443 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 SPATA2LQ8IUW3 424 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 HS6ST3Q8IZP7 471 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 SLC4A11Q8NBS3 891 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 TFAP2BQ92481 460 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 PCED1BQ96HM7 432 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 NT5C1AQ9BXI3 368 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 PARVAQ9NVD7 372 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 DNMT3BQ9UBC3 853 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 KIAA1257Q9ULG3 409 aa15.28■□□□□ 0.04
TNFRSF1A-204ENST00000440083 A0A0C4DFX4 3053 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 GOLGA6L10A0A0M3HER8 536 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CCDC151A5D8V7 595 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms